Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CLIP1P30622 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP1P30622 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP1P30622 CASC19-221ENST00000641309 1382 ntBASIC8.13□□□□□ -1.11
CLIP1P30622 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC8.13□□□□□ -1.11
CLIP1P30622 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP1P30622 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP1P30622 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
CLIP1P30622 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP1P30622 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP1P30622 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP1P30622 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP1P30622 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CLIP1P30622 SNORA2.3-201ENST00000383920 135 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 MIR141-201ENST00000384975 95 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP1P30622 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP1P30622 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP1P30622 OR7E125P-201ENST00000443450 846 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 GAPDHP14-201ENST00000450472 937 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP1P30622 BX842559.2-201ENST00000451418 605 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 MRPS33P2-201ENST00000507850 322 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP1P30622 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC8.12□□□□□ -1.11
CLIP1P30622 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP1P30622 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP1P30622 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CLIP1P30622 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC8.12□□□□□ -1.11
CLIP1P30622 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP1P30622 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP1P30622 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC8.12□□□□□ -1.11
CLIP1P30622 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC8.12□□□□□ -1.11
CLIP1P30622 OR1L6-202ENST00000373684 1044 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 SNORA66-201ENST00000384792 133 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 MIR192-201ENST00000384915 110 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 RPL12P9-201ENST00000412942 488 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.12□□□□□ -1.11
CLIP1P30622 OR2AM1P-201ENST00000422137 422 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP1P30622 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP1P30622 AC006463.2-201ENST00000473326 348 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP1P30622 CEACAMP10-202ENST00000495431 496 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 AC021006.3-201ENST00000530771 192 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 AC022884.2-201ENST00000578535 580 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC8.12□□□□□ -1.11
CLIP1P30622 AC011487.3-201ENST00000593607 453 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 AC108359.1-201ENST00000616451 1211 ntBASIC8.12□□□□□ -1.11
CLIP1P30622 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC8.12□□□□□ -1.11
CLIP1P30622 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
CLIP1P30622 AC012618.3-205ENST00000637896 1496 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP1P30622 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP1P30622 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC8.11□□□□□ -1.11
CLIP1P30622 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP1P30622 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP1P30622 RNU11-201ENST00000387069 134 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 U3.32-201ENST00000408116 212 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC8.11□□□□□ -1.11
CLIP1P30622 AC009238.2-201ENST00000431026 355 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC8.11□□□□□ -1.11
CLIP1P30622 TCEA1P1-201ENST00000449716 880 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 RPS29P33-201ENST00000456717 146 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 RN7SL738P-201ENST00000470264 297 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 BTF3P13-201ENST00000513224 490 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.11□□□□□ -1.11
CLIP1P30622 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 AF230666.2-201ENST00000602328 725 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 AL360012.1-201ENST00000602813 131 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 AC005377.1-201ENST00000605126 456 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC8.11□□□□□ -1.11
CLIP1P30622 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 EEF1A1P36-201ENST00000427807 1351 ntBASIC8.11□□□□□ -1.11
CLIP1P30622 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP1P30622 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CLIP1P30622 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP1P30622 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CLIP1P30622 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP1P30622 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CLIP1P30622 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CLIP1P30622 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.1□□□□□ -1.11
CLIP1P30622 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP1P30622 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP1P30622 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP1P30622 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP1P30622 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
CLIP1P30622 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP1P30622 FHIT-201ENST00000341848 174 ntTSL 3 BASIC8.1□□□□□ -1.11
CLIP1P30622 RN7SKP113-201ENST00000363891 295 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP1P30622 AL390316.1-201ENST00000406279 553 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 RN7SKP16-201ENST00000410180 299 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms