Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC135068.12-201ENST00000637370 931 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTLA4P16410 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 PROS2P-201ENST00000474651 1951 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.57□□□□□ -1.68
CTLA4P16410 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 MIR323A-201ENST00000362199 86 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 RNA5SP183-201ENST00000362452 119 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.57□□□□□ -1.68
CTLA4P16410 RN7SKP59-201ENST00000410520 314 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 RPL35AP24-201ENST00000413846 330 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.57□□□□□ -1.68
CTLA4P16410 RPS4XP16-201ENST00000427198 791 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 RPL7L1P9-201ENST00000431298 745 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.57□□□□□ -1.68
CTLA4P16410 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.57□□□□□ -1.68
CTLA4P16410 RPL7AP61-201ENST00000443410 636 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 AL136038.1-201ENST00000497246 351 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.57□□□□□ -1.68
CTLA4P16410 SUMO2P4-201ENST00000504193 276 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.57□□□□□ -1.68
CTLA4P16410 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.57□□□□□ -1.68
CTLA4P16410 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.57□□□□□ -1.68
CTLA4P16410 AC018695.5-201ENST00000605872 315 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 FAM72A-208ENST00000607379 1139 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 AP005432.2-201ENST00000608162 586 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 MUC2-202ENST00000613187 4845 ntBASIC4.57□□□□□ -1.68
CTLA4P16410 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.57□□□□□ -1.68
CTLA4P16410 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTLA4P16410 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.56□□□□□ -1.68
CTLA4P16410 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTLA4P16410 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CTLA4P16410 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTLA4P16410 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.56□□□□□ -1.68
CTLA4P16410 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTLA4P16410 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTLA4P16410 NUDT19P3-201ENST00000404698 555 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 MIR1182-201ENST00000408363 97 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 AC108075.1-201ENST00000424692 529 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 RPL12P11-201ENST00000439970 501 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 SPRYD7P1-201ENST00000443861 570 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 AC135999.1-201ENST00000478962 479 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTLA4P16410 COX6B1P2-201ENST00000489624 230 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 AC108693.1-201ENST00000496068 432 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.56□□□□□ -1.68
CTLA4P16410 GTF2F2P1-201ENST00000511083 675 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.56□□□□□ -1.68
CTLA4P16410 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.56□□□□□ -1.68
CTLA4P16410 AC134349.2-201ENST00000535136 910 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.56□□□□□ -1.68
CTLA4P16410 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.56□□□□□ -1.68
CTLA4P16410 AC002069.2-201ENST00000603580 883 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.56□□□□□ -1.68
CTLA4P16410 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 AC090527.3-201ENST00000619041 548 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.56□□□□□ -1.68
CTLA4P16410 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTLA4P16410 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTLA4P16410 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTLA4P16410 Z95331.1-201ENST00000623075 23112 ntBASIC4.56□□□□□ -1.68
CTLA4P16410 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CTLA4P16410 AC100778.3-201ENST00000580060 1750 ntBASIC4.55□□□□□ -1.68
CTLA4P16410 CASC19-221ENST00000641309 1382 ntBASIC4.55□□□□□ -1.68
CTLA4P16410 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.55□□□□□ -1.68
CTLA4P16410 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTLA4P16410 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTLA4P16410 U3.2-201ENST00000362981 210 ntBASIC4.55□□□□□ -1.68
CTLA4P16410 MIR143-201ENST00000385300 106 ntBASIC4.55□□□□□ -1.68
CTLA4P16410 OR3A2-201ENST00000408891 1076 ntBASIC4.55□□□□□ -1.68
CTLA4P16410 AL121776.1-201ENST00000429337 372 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms