Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 C1DP1-201ENST00000426049 402 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AL592437.1-201ENST00000443781 492 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 MTCYBP42-201ENST00000444653 1130 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 RPL34P33-201ENST00000486062 334 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC063943.2-201ENST00000495697 534 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC116353.2-201ENST00000505332 712 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 ST13P12-201ENST00000508958 1094 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 BTG4P1-201ENST00000510421 183 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC087481.2-201ENST00000565492 330 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AL136363.2-201ENST00000604173 851 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC072039.2-201ENST00000608883 439 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 MIR6768-201ENST00000610734 72 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC079395.2-201ENST00000610982 737 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 FRG1HP-204ENST00000617940 757 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC111188.2-201ENST00000529697 1387 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 RNU6-83P-201ENST00000384568 112 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 Y_RNA.553-201ENST00000384670 102 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 MIR142-201ENST00000384835 87 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 MIR1204-201ENST00000408388 67 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 ZDHHC20P2-201ENST00000424108 429 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AL139415.2-201ENST00000431968 163 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 LYPLA1P1-201ENST00000434514 622 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC097499.1-201ENST00000444277 208 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AL161636.2-201ENST00000445179 927 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AP000936.2-201ENST00000447151 681 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC097262.1-201ENST00000452559 548 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 SEPT7P3-201ENST00000455017 621 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 SYPL1P1-201ENST00000473622 768 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC069528.1-202ENST00000482888 637 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC114781.3-201ENST00000512083 142 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 NPM1P21-201ENST00000513394 762 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AP003396.4-201ENST00000527574 265 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 NPIPB1P-202ENST00000588786 828 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AP002884.5-201ENST00000595053 1132 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC021749.1-201ENST00000604322 607 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC018690.1-201ENST00000608144 626 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC010435.1-201ENST00000623353 1177 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC117409.1-201ENST00000470499 1310 ntBASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms