Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.68□□□□□ -1.66
FREM3P0C091 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
FREM3P0C091 MAPK10-286ENST00000641208 8747 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
FREM3P0C091 SNORA70-201ENST00000384436 135 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.68□□□□□ -1.66
FREM3P0C091 COX5BP7-201ENST00000414780 274 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.68□□□□□ -1.66
FREM3P0C091 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.68□□□□□ -1.66
FREM3P0C091 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FREM3P0C091 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.68□□□□□ -1.66
FREM3P0C091 VN1R54P-201ENST00000435210 1049 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 RN7SL808P-201ENST00000496066 299 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 GLUD1P3-202ENST00000508551 200 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.68□□□□□ -1.66
FREM3P0C091 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.68□□□□□ -1.66
FREM3P0C091 AC009027.1-201ENST00000604510 479 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.68□□□□□ -1.66
FREM3P0C091 BX005214.3-202ENST00000619809 325 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.68□□□□□ -1.66
FREM3P0C091 CASC19-221ENST00000641309 1382 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
FREM3P0C091 AL591135.1-201ENST00000401578 5914 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
FREM3P0C091 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FREM3P0C091 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FREM3P0C091 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.68□□□□□ -1.66
FREM3P0C091 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FREM3P0C091 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FREM3P0C091 AC097634.1-201ENST00000604491 2467 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 AC007342.5-201ENST00000571340 2142 ntBASIC4.68□□□□□ -1.66
FREM3P0C091 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 AC002525.1-201ENST00000624392 1622 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
FREM3P0C091 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.67□□□□□ -1.66
FREM3P0C091 MIR550A3-201ENST00000390735 95 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 HYALP1-201ENST00000417674 1279 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.67□□□□□ -1.66
FREM3P0C091 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.67□□□□□ -1.66
FREM3P0C091 RPS27P18-201ENST00000431701 247 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.67□□□□□ -1.66
FREM3P0C091 PRPF38AP1-201ENST00000451976 933 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 RPL7P16-201ENST00000479738 738 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.67□□□□□ -1.66
FREM3P0C091 RN7SKP147-201ENST00000517154 244 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.67□□□□□ -1.66
FREM3P0C091 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.67□□□□□ -1.66
FREM3P0C091 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.67□□□□□ -1.66
FREM3P0C091 AL356752.1-201ENST00000615844 593 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
FREM3P0C091 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
FREM3P0C091 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.67□□□□□ -1.66
FREM3P0C091 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
FREM3P0C091 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
FREM3P0C091 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.67□□□□□ -1.66
FREM3P0C091 NDUFB4P8-201ENST00000435351 367 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.67□□□□□ -1.66
FREM3P0C091 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.67□□□□□ -1.66
FREM3P0C091 AC091685.2-201ENST00000454924 864 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 AC231760.1-201ENST00000498002 260 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 SNORA26.10-201ENST00000516427 141 ntBASIC4.67□□□□□ -1.66
FREM3P0C091 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FREM3P0C091 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.67□□□□□ -1.66
FREM3P0C091 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
FREM3P0C091 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.67□□□□□ -1.66
FREM3P0C091 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.67□□□□□ -1.66
FREM3P0C091 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FREM3P0C091 AC112255.1-201ENST00000624070 2493 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 MRRFP1-201ENST00000435941 1675 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FREM3P0C091 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 HMGB3P7-201ENST00000400214 611 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC093162.1-201ENST00000419682 124 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC017019.1-201ENST00000426129 261 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC093414.1-201ENST00000434712 514 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AL645937.3-201ENST00000453647 936 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 RPS17P2-201ENST00000461663 408 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 EIF1P7-201ENST00000487533 337 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.66□□□□□ -1.66
FREM3P0C091 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.66□□□□□ -1.66
FREM3P0C091 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.66□□□□□ -1.66
FREM3P0C091 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
FREM3P0C091 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.66□□□□□ -1.66
FREM3P0C091 AC083837.1-201ENST00000565297 2994 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
FREM3P0C091 AC073136.1-201ENST00000449426 2884 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms