Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TPM1P09493 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TPM1P09493 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TPM1P09493 MTCO1P15-201ENST00000529569 1526 ntBASIC5.75□□□□□ -1.49
TPM1P09493 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 OR7E25P-201ENST00000344844 931 ntBASIC5.75□□□□□ -1.49
TPM1P09493 RN7SKP171-201ENST00000364417 303 ntBASIC5.75□□□□□ -1.49
TPM1P09493 Z68694.1-201ENST00000413929 841 ntBASIC5.75□□□□□ -1.49
TPM1P09493 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 MARK2P12-201ENST00000420129 585 ntBASIC5.75□□□□□ -1.49
TPM1P09493 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM1P09493 RPL36AP10-201ENST00000421785 322 ntBASIC5.75□□□□□ -1.49
TPM1P09493 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.75□□□□□ -1.49
TPM1P09493 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 RPL35AP21-201ENST00000437667 333 ntBASIC5.75□□□□□ -1.49
TPM1P09493 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.75□□□□□ -1.49
TPM1P09493 RPS11P7-201ENST00000442125 465 ntBASIC5.75□□□□□ -1.49
TPM1P09493 BTF3P6-201ENST00000448054 499 ntBASIC5.75□□□□□ -1.49
TPM1P09493 AC104339.1-201ENST00000465478 348 ntBASIC5.75□□□□□ -1.49
TPM1P09493 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.75□□□□□ -1.49
TPM1P09493 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM1P09493 RNA5SP303-201ENST00000516192 130 ntBASIC5.75□□□□□ -1.49
TPM1P09493 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM1P09493 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM1P09493 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.75□□□□□ -1.49
TPM1P09493 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 AL049872.1-201ENST00000556323 322 ntBASIC5.75□□□□□ -1.49
TPM1P09493 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 AL162431.4-201ENST00000604674 411 ntBASIC5.75□□□□□ -1.49
TPM1P09493 AC018695.5-201ENST00000605872 315 ntBASIC5.75□□□□□ -1.49
TPM1P09493 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM1P09493 TMEM30CP-203ENST00000637814 1035 ntBASIC5.75□□□□□ -1.49
TPM1P09493 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM1P09493 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM1P09493 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TPM1P09493 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
TPM1P09493 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.74□□□□□ -1.49
TPM1P09493 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM1P09493 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TPM1P09493 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TPM1P09493 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TPM1P09493 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
TPM1P09493 AC013442.1-201ENST00000397347 228 ntBASIC5.74□□□□□ -1.49
TPM1P09493 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TPM1P09493 SRSF1P1-201ENST00000424058 520 ntBASIC5.74□□□□□ -1.49
TPM1P09493 SETP10-201ENST00000424368 814 ntBASIC5.74□□□□□ -1.49
TPM1P09493 NAP1L4P2-201ENST00000425958 899 ntBASIC5.74□□□□□ -1.49
TPM1P09493 CLUHP1-201ENST00000435012 1190 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC092447.2-201ENST00000435487 669 ntBASIC5.74□□□□□ -1.49
TPM1P09493 Z84478.1-201ENST00000438230 1219 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC105399.1-202ENST00000447303 205 ntBASIC5.74□□□□□ -1.49
TPM1P09493 NOP56P2-201ENST00000447491 769 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AL445665.1-202ENST00000452436 324 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC093890.1-201ENST00000502554 540 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC073358.1-201ENST00000505671 684 ntBASIC5.74□□□□□ -1.49
TPM1P09493 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM1P09493 RNA5SP271-201ENST00000516700 88 ntBASIC5.74□□□□□ -1.49
TPM1P09493 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.74□□□□□ -1.49
TPM1P09493 AC105031.1-201ENST00000518550 476 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC011853.1-201ENST00000518911 454 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.74□□□□□ -1.49
TPM1P09493 AC078878.1-201ENST00000539832 958 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC008126.1-201ENST00000549019 480 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TPM1P09493 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM1P09493 AC008115.3-201ENST00000614874 549 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AL591926.1-201ENST00000620542 217 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC074140.1-201ENST00000621617 208 ntBASIC5.74□□□□□ -1.49
TPM1P09493 AC007683.2-201ENST00000624681 714 ntBASIC5.74□□□□□ -1.49
TPM1P09493 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM1P09493 BTBD10P1-201ENST00000549824 1352 ntBASIC5.74□□□□□ -1.49
TPM1P09493 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TPM1P09493 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.74□□□□□ -1.49
TPM1P09493 SCN1A-220ENST00000641603 12506 ntBASIC5.74□□□□□ -1.49
TPM1P09493 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TPM1P09493 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
TPM1P09493 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM1P09493 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM1P09493 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM1P09493 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.73□□□□□ -1.49
TPM1P09493 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
TPM1P09493 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM1P09493 RNU4-44P-201ENST00000363050 141 ntBASIC5.73□□□□□ -1.49
TPM1P09493 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms