Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P09429 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
HMGB1P09429 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P09429 OR52E6-202ENST00000379946 954 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 AL035419.1-201ENST00000397037 564 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 AL096711.1-201ENST00000404780 554 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGB1P09429 TNPO1P1-201ENST00000423641 1138 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 AL031736.2-201ENST00000426573 787 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGB1P09429 RPS3AP38-201ENST00000435889 763 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 BX679664.2-201ENST00000439282 283 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 RPS7P3-201ENST00000443360 580 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGB1P09429 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGB1P09429 AL445466.1-201ENST00000448432 357 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 HMGB3P21-201ENST00000452483 547 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGB1P09429 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGB1P09429 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P09429 COX6B1P6-201ENST00000522347 255 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGB1P09429 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGB1P09429 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGB1P09429 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P09429 SETP1-201ENST00000556014 845 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGB1P09429 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
HMGB1P09429 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.07□□□□□ -1.28
HMGB1P09429 AC124916.2-201ENST00000604416 224 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 AL445670.1-201ENST00000618889 801 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 AC138907.10-201ENST00000623708 983 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 AC097372.4-201ENST00000625025 466 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P09429 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGB1P09429 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGB1P09429 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P09429 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P09429 AC017007.4-201ENST00000503353 1352 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 AC134882.1-201ENST00000603738 1676 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 AC100871.1-201ENST00000507871 1456 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGB1P09429 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HMGB1P09429 RN7SKP128-201ENST00000364270 303 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 GCNT1P4-201ENST00000404096 329 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 HMGB3P31-201ENST00000413333 595 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AL445183.3-201ENST00000414168 502 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AC008173.1-201ENST00000418901 264 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.06□□□□□ -1.28
HMGB1P09429 ETF1P3-201ENST00000430422 1160 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 YWHAQP9-201ENST00000445891 512 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AC009963.3-201ENST00000458090 486 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AL035404.1-201ENST00000497982 568 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.06□□□□□ -1.28
HMGB1P09429 AC092349.1-201ENST00000504903 310 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.06□□□□□ -1.28
HMGB1P09429 HSD3BP3-201ENST00000514706 994 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 HMGB3P26-201ENST00000560051 582 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.06□□□□□ -1.28
HMGB1P09429 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 AC125494.3-201ENST00000602759 455 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AC069304.3-201ENST00000603938 1084 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 PPATP2-201ENST00000605635 508 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AC093388.1-201ENST00000609166 430 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AL359091.2-201ENST00000609303 556 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 uc_338.26-201ENST00000612659 160 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 AC095038.2-201ENST00000621464 1070 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 SNX18P12-201ENST00000624821 759 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 GVINP1-202ENST00000531871 7271 ntBASIC7.06□□□□□ -1.28
HMGB1P09429 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGB1P09429 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGB1P09429 CROT-204ENST00000442291 1993 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGB1P09429 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HMGB1P09429 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGB1P09429 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGB1P09429 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGB1P09429 AC008432.1-201ENST00000615912 1320 ntBASIC7.05□□□□□ -1.28
HMGB1P09429 CASC19-260ENST00000641828 2001 ntBASIC7.05□□□□□ -1.28
HMGB1P09429 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGB1P09429 IFIT1P1-201ENST00000400497 1449 ntBASIC7.05□□□□□ -1.28
HMGB1P09429 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HMGB1P09429 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms