Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 OR7M1P-201ENST00000608946 533 ntBASIC5.95□□□□□ -1.46
MMP3P08254 AL512506.1-201ENST00000613918 449 ntBASIC5.95□□□□□ -1.46
MMP3P08254 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.95□□□□□ -1.46
MMP3P08254 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
MMP3P08254 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 AC005261.2-201ENST00000593427 4258 ntBASIC5.94□□□□□ -1.46
MMP3P08254 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 RNU6-152P-201ENST00000384037 107 ntBASIC5.94□□□□□ -1.46
MMP3P08254 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.94□□□□□ -1.46
MMP3P08254 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.94□□□□□ -1.46
MMP3P08254 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.94□□□□□ -1.46
MMP3P08254 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.94□□□□□ -1.46
MMP3P08254 RPA2P2-201ENST00000419698 796 ntBASIC5.94□□□□□ -1.46
MMP3P08254 FAR1P1-201ENST00000427163 934 ntBASIC5.94□□□□□ -1.46
MMP3P08254 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.94□□□□□ -1.46
MMP3P08254 MTCO1P57-201ENST00000432182 261 ntBASIC5.94□□□□□ -1.46
MMP3P08254 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.94□□□□□ -1.46
MMP3P08254 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.94□□□□□ -1.46
MMP3P08254 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.94□□□□□ -1.46
MMP3P08254 GTF2F2P1-201ENST00000511083 675 ntBASIC5.94□□□□□ -1.46
MMP3P08254 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.94□□□□□ -1.46
MMP3P08254 MTND2P17-201ENST00000550281 688 ntBASIC5.94□□□□□ -1.46
MMP3P08254 AL136520.1-202ENST00000555494 763 ntBASIC5.94□□□□□ -1.46
MMP3P08254 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.94□□□□□ -1.46
MMP3P08254 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.94□□□□□ -1.46
MMP3P08254 AC105148.1-201ENST00000604961 409 ntBASIC5.94□□□□□ -1.46
MMP3P08254 MIR6820-201ENST00000611508 62 ntBASIC5.94□□□□□ -1.46
MMP3P08254 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
MMP3P08254 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
MMP3P08254 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 SAMMSON-210ENST00000641260 1308 ntBASIC5.94□□□□□ -1.46
MMP3P08254 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.94□□□□□ -1.46
MMP3P08254 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
MMP3P08254 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MMP3P08254 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
MMP3P08254 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 AC114774.1-201ENST00000507410 1770 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AL359955.1-201ENST00000455242 3275 ntBASIC5.93□□□□□ -1.46
MMP3P08254 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
MMP3P08254 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.93□□□□□ -1.46
MMP3P08254 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 SNURFL-201ENST00000309296 343 ntBASIC5.93□□□□□ -1.46
MMP3P08254 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MMP3P08254 RN7SKP104-201ENST00000362605 328 ntBASIC5.93□□□□□ -1.46
MMP3P08254 RN7SKP103-201ENST00000363848 320 ntBASIC5.93□□□□□ -1.46
MMP3P08254 MIR7-1-201ENST00000384871 110 ntBASIC5.93□□□□□ -1.46
MMP3P08254 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.93□□□□□ -1.46
MMP3P08254 CHMP1B2P-201ENST00000399581 597 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.93□□□□□ -1.46
MMP3P08254 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.93□□□□□ -1.46
MMP3P08254 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.93□□□□□ -1.46
MMP3P08254 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.93□□□□□ -1.46
MMP3P08254 MTND4LP7-201ENST00000431728 294 ntBASIC5.93□□□□□ -1.46
MMP3P08254 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.93□□□□□ -1.46
MMP3P08254 AL590399.4-201ENST00000436561 601 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AL606490.8-201ENST00000441624 319 ntBASIC5.93□□□□□ -1.46
MMP3P08254 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.93□□□□□ -1.46
MMP3P08254 LINC02210-201ENST00000444561 288 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AC073072.2-201ENST00000447425 348 ntBASIC5.93□□□□□ -1.46
MMP3P08254 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.93□□□□□ -1.46
MMP3P08254 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.93□□□□□ -1.46
MMP3P08254 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.93□□□□□ -1.46
MMP3P08254 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.93□□□□□ -1.46
MMP3P08254 OR5AZ1P-201ENST00000527448 943 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.93□□□□□ -1.46
MMP3P08254 AP002373.2-201ENST00000541631 1060 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.93□□□□□ -1.46
MMP3P08254 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
MMP3P08254 VN1R81P-201ENST00000602085 372 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AC005252.1-201ENST00000604518 1063 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AC073111.2-201ENST00000605657 1075 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AC096586.2-201ENST00000610260 441 ntBASIC5.93□□□□□ -1.46
MMP3P08254 AC100827.5-201ENST00000615883 426 ntBASIC5.93□□□□□ -1.46
MMP3P08254 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms