Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CTSDP07339 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.34□□□□□ -1.72
CTSDP07339 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTSDP07339 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.33□□□□□ -1.72
CTSDP07339 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTSDP07339 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.33□□□□□ -1.72
CTSDP07339 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 RNU4-44P-201ENST00000363050 141 ntBASIC4.33□□□□□ -1.72
CTSDP07339 RNA5SP394-201ENST00000364216 119 ntBASIC4.33□□□□□ -1.72
CTSDP07339 SNORA16A-201ENST00000384342 137 ntBASIC4.33□□□□□ -1.72
CTSDP07339 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CTSDP07339 U3.32-201ENST00000408116 212 ntBASIC4.33□□□□□ -1.72
CTSDP07339 MIR1282-201ENST00000408865 101 ntBASIC4.33□□□□□ -1.72
CTSDP07339 RN7SKP286-201ENST00000410894 299 ntBASIC4.33□□□□□ -1.72
CTSDP07339 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.33□□□□□ -1.72
CTSDP07339 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.33□□□□□ -1.72
CTSDP07339 NPM1P33-201ENST00000438918 872 ntBASIC4.33□□□□□ -1.72
CTSDP07339 LDHBP2-201ENST00000456969 1005 ntBASIC4.33□□□□□ -1.72
CTSDP07339 GYG1P1-201ENST00000460864 698 ntBASIC4.33□□□□□ -1.72
CTSDP07339 NPM1P29-201ENST00000483112 803 ntBASIC4.33□□□□□ -1.72
CTSDP07339 RN7SKP46-201ENST00000515942 234 ntBASIC4.33□□□□□ -1.72
CTSDP07339 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.33□□□□□ -1.72
CTSDP07339 YWHABP2-201ENST00000540201 713 ntBASIC4.33□□□□□ -1.72
CTSDP07339 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 AGGF1P9-201ENST00000561884 913 ntBASIC4.33□□□□□ -1.72
CTSDP07339 RBM22P12-201ENST00000567098 1255 ntBASIC4.33□□□□□ -1.72
CTSDP07339 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 AC060766.1-201ENST00000590824 627 ntBASIC4.33□□□□□ -1.72
CTSDP07339 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 AC008814.1-201ENST00000603797 406 ntBASIC4.33□□□□□ -1.72
CTSDP07339 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 MIR6861-201ENST00000618657 64 ntBASIC4.33□□□□□ -1.72
CTSDP07339 AC118658.2-201ENST00000618697 459 ntBASIC4.33□□□□□ -1.72
CTSDP07339 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 AP000542.2-201ENST00000623199 6179 ntBASIC4.33□□□□□ -1.72
CTSDP07339 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.33□□□□□ -1.72
CTSDP07339 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.33□□□□□ -1.72
CTSDP07339 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTSDP07339 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CTSDP07339 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTSDP07339 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
CTSDP07339 ICE2P1-201ENST00000512800 1849 ntBASIC4.32□□□□□ -1.72
CTSDP07339 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 YES1P1-201ENST00000418510 1628 ntBASIC4.32□□□□□ -1.72
CTSDP07339 AC091305.2-201ENST00000624049 1576 ntBASIC4.32□□□□□ -1.72
CTSDP07339 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CTSDP07339 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CTSDP07339 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.32□□□□□ -1.72
CTSDP07339 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.32□□□□□ -1.72
CTSDP07339 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 RNA5SP510-201ENST00000364697 99 ntBASIC4.32□□□□□ -1.72
CTSDP07339 RN7SKP28-201ENST00000364770 305 ntBASIC4.32□□□□□ -1.72
CTSDP07339 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.32□□□□□ -1.72
CTSDP07339 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTSDP07339 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.32□□□□□ -1.72
CTSDP07339 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.32□□□□□ -1.72
CTSDP07339 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.32□□□□□ -1.72
CTSDP07339 PCNPP2-201ENST00000441651 455 ntBASIC4.32□□□□□ -1.72
CTSDP07339 RPL7AP61-201ENST00000443410 636 ntBASIC4.32□□□□□ -1.72
CTSDP07339 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 LRRC37A14P-201ENST00000452297 462 ntBASIC4.32□□□□□ -1.72
CTSDP07339 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.32□□□□□ -1.72
CTSDP07339 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.32□□□□□ -1.72
CTSDP07339 RN7SL346P-201ENST00000491561 294 ntBASIC4.32□□□□□ -1.72
CTSDP07339 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.32□□□□□ -1.72
CTSDP07339 RPL23AP53-201ENST00000521854 457 ntBASIC4.32□□□□□ -1.72
CTSDP07339 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.32□□□□□ -1.72
CTSDP07339 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.32□□□□□ -1.72
CTSDP07339 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.32□□□□□ -1.72
CTSDP07339 AC100767.2-201ENST00000604840 693 ntBASIC4.32□□□□□ -1.72
CTSDP07339 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 MIR8069-1-201ENST00000616627 86 ntBASIC4.32□□□□□ -1.72
CTSDP07339 MIR8069-2-201ENST00000621412 86 ntBASIC4.32□□□□□ -1.72
CTSDP07339 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.32□□□□□ -1.72
CTSDP07339 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.32□□□□□ -1.72
CTSDP07339 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.32□□□□□ -1.72
CTSDP07339 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTSDP07339 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
CTSDP07339 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.31□□□□□ -1.72
CTSDP07339 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms