Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHRNA1P02708 snoU13.20-201ENST00000459180 104 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AC097486.1-201ENST00000515331 210 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.78□□□□□ -1.48
CHRNA1P02708 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHRNA1P02708 AC104785.1-201ENST00000603220 588 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 RNU6-84P-201ENST00000607737 102 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AP003072.5-201ENST00000623872 773 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHRNA1P02708 AL359715.3-201ENST00000569267 2123 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHRNA1P02708 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AC239868.2-201ENST00000564237 4527 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHRNA1P02708 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CHRNA1P02708 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.77□□□□□ -1.49
CHRNA1P02708 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CHRNA1P02708 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA1P02708 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CHRNA1P02708 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CHRNA1P02708 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA1P02708 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.77□□□□□ -1.49
CHRNA1P02708 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA1P02708 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CHRNA1P02708 MTHFD2P5-201ENST00000320415 844 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.77□□□□□ -1.49
CHRNA1P02708 AC108751.3-201ENST00000461814 1020 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 AC083982.1-201ENST00000485679 344 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 IGLV2-34-201ENST00000490007 283 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 RN7SL591P-201ENST00000496150 292 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.77□□□□□ -1.49
CHRNA1P02708 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.77□□□□□ -1.49
CHRNA1P02708 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.77□□□□□ -1.49
CHRNA1P02708 RNA5SP228-201ENST00000516232 133 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 AC012400.1-201ENST00000518452 381 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA1P02708 AC005000.1-201ENST00000536192 288 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.77□□□□□ -1.49
CHRNA1P02708 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.77□□□□□ -1.49
CHRNA1P02708 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA1P02708 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CHRNA1P02708 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CHRNA1P02708 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.77□□□□□ -1.49
CHRNA1P02708 MIR6820-201ENST00000611508 62 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 RNA5SP439-201ENST00000617595 124 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA1P02708 AP003400.3-201ENST00000624904 346 ntBASIC5.77□□□□□ -1.49
CHRNA1P02708 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CHRNA1P02708 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CHRNA1P02708 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CHRNA1P02708 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA1P02708 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA1P02708 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.77□□□□□ -1.49
CHRNA1P02708 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC010266.2-201ENST00000564741 3255 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CHRNA1P02708 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.76□□□□□ -1.49
CHRNA1P02708 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 AL035419.1-201ENST00000397037 564 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 PEX12P1-201ENST00000400284 1048 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 AL078599.1-201ENST00000402075 293 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.76□□□□□ -1.49
CHRNA1P02708 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC073465.2-201ENST00000440938 498 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 VN1R96P-201ENST00000446052 858 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC091544.1-201ENST00000484702 348 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC112184.1-201ENST00000505179 312 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC092593.2-201ENST00000513866 913 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA1P02708 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA1P02708 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA1P02708 AC009027.1-201ENST00000604510 479 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 Z95327.3-201ENST00000610385 572 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms