Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.83□□□□□ -1.64
SPTA1P02549 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.83□□□□□ -1.64
SPTA1P02549 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.83□□□□□ -1.64
SPTA1P02549 AC079080.1-201ENST00000479841 822 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 RPS7P6-201ENST00000485777 579 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 FTH1P8-201ENST00000498161 514 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.83□□□□□ -1.64
SPTA1P02549 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.83□□□□□ -1.64
SPTA1P02549 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.82□□□□□ -1.64
SPTA1P02549 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SPTA1P02549 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SPTA1P02549 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 AC091390.3-201ENST00000426478 338 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 FTH1P10-202ENST00000430907 550 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 AL590399.4-201ENST00000436561 601 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.82□□□□□ -1.64
SPTA1P02549 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.82□□□□□ -1.64
SPTA1P02549 AC073358.1-201ENST00000505671 684 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 AC084824.1-201ENST00000550917 1005 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.82□□□□□ -1.64
SPTA1P02549 AC004890.3-201ENST00000605566 1095 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 AC024941.1-201ENST00000612250 334 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.82□□□□□ -1.64
SPTA1P02549 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPTA1P02549 GAPDHP15-201ENST00000398586 975 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 AL021331.1-201ENST00000402817 582 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 CHEK2P3-201ENST00000416118 248 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 MRPS21P2-201ENST00000424704 264 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.82□□□□□ -1.64
SPTA1P02549 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.82□□□□□ -1.64
SPTA1P02549 SNORA59A-201ENST00000459326 152 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 AC097484.1-201ENST00000471148 389 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.82□□□□□ -1.64
SPTA1P02549 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.82□□□□□ -1.64
SPTA1P02549 UBE2FP2-201ENST00000566646 462 ntBASIC4.82□□□□□ -1.64
SPTA1P02549 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.82□□□□□ -1.64
SPTA1P02549 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.82□□□□□ -1.64
SPTA1P02549 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.81□□□□□ -1.64
SPTA1P02549 MFSD8-216ENST00000641147 4009 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SPTA1P02549 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC4.81□□□□□ -1.64
SPTA1P02549 MAPK10-270ENST00000641102 3538 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 THAP12P9-201ENST00000503971 2360 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 AC006511.3-201ENST00000624929 1783 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
SPTA1P02549 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.81□□□□□ -1.64
SPTA1P02549 RN7SKP224-201ENST00000364140 325 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 SNORA11.1-201ENST00000408133 129 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.81□□□□□ -1.64
SPTA1P02549 GJA6P-201ENST00000415117 1042 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.81□□□□□ -1.64
SPTA1P02549 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.81□□□□□ -1.64
SPTA1P02549 RPS29P9-201ENST00000440360 171 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 AC073465.2-201ENST00000440938 498 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.81□□□□□ -1.64
SPTA1P02549 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.81□□□□□ -1.64
SPTA1P02549 AC023424.1-201ENST00000496058 459 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 RPSAP51-201ENST00000497462 645 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 IGLV3-24-201ENST00000517477 197 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.81□□□□□ -1.64
SPTA1P02549 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.81□□□□□ -1.64
SPTA1P02549 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.81□□□□□ -1.64
SPTA1P02549 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 AC063976.2-201ENST00000425667 3556 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SPTA1P02549 HSPD1P7-201ENST00000447985 1686 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SPTA1P02549 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 AC023141.6-201ENST00000429418 337 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.81□□□□□ -1.64
SPTA1P02549 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.81□□□□□ -1.64
SPTA1P02549 AGGF1P7-201ENST00000562369 913 ntBASIC4.81□□□□□ -1.64
SPTA1P02549 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.81□□□□□ -1.64
SPTA1P02549 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.81□□□□□ -1.64
SPTA1P02549 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SPTA1P02549 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPTA1P02549 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPTA1P02549 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPTA1P02549 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.8□□□□□ -1.64
SPTA1P02549 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms