Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFP01375 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFP01375 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFP01375 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFP01375 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFP01375 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFP01375 OR9G4-201ENST00000302957 984 ntBASIC5.08□□□□□ -1.6
TNFP01375 RNA5SP123-201ENST00000363244 119 ntBASIC5.08□□□□□ -1.6
TNFP01375 RNU1-74P-201ENST00000384108 171 ntBASIC5.08□□□□□ -1.6
TNFP01375 AL109941.1-201ENST00000401925 229 ntBASIC5.08□□□□□ -1.6
TNFP01375 AL139128.1-201ENST00000413921 941 ntBASIC5.08□□□□□ -1.6
TNFP01375 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFP01375 NPM1P25-201ENST00000429734 854 ntBASIC5.08□□□□□ -1.6
TNFP01375 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFP01375 NDUFA5P8-201ENST00000449019 346 ntBASIC5.08□□□□□ -1.6
TNFP01375 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFP01375 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.08□□□□□ -1.6
TNFP01375 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFP01375 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFP01375 AC110775.1-201ENST00000513721 462 ntBASIC5.08□□□□□ -1.6
TNFP01375 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFP01375 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFP01375 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFP01375 SETP3-201ENST00000581726 813 ntBASIC5.08□□□□□ -1.6
TNFP01375 AC011840.5-201ENST00000582125 771 ntBASIC5.08□□□□□ -1.6
TNFP01375 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFP01375 AC011626.1-201ENST00000604710 562 ntBASIC5.08□□□□□ -1.6
TNFP01375 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFP01375 Mico1.1-201ENST00000611698 204 ntBASIC5.08□□□□□ -1.6
TNFP01375 AL445528.2-201ENST00000620582 470 ntBASIC5.08□□□□□ -1.6
TNFP01375 AL022322.2-201ENST00000624072 20397 ntBASIC5.08□□□□□ -1.6
TNFP01375 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFP01375 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFP01375 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFP01375 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFP01375 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFP01375 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TNFP01375 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFP01375 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFP01375 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFP01375 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFP01375 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
TNFP01375 SNORA70.6-201ENST00000383934 134 ntBASIC5.07□□□□□ -1.6
TNFP01375 AL078599.1-201ENST00000402075 293 ntBASIC5.07□□□□□ -1.6
TNFP01375 RN7SKP114-201ENST00000410327 279 ntBASIC5.07□□□□□ -1.6
TNFP01375 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFP01375 AC099670.2-201ENST00000435130 321 ntBASIC5.07□□□□□ -1.6
TNFP01375 PA2G4P6-201ENST00000438325 1197 ntBASIC5.07□□□□□ -1.6
TNFP01375 AC006466.1-201ENST00000438721 289 ntBASIC5.07□□□□□ -1.6
TNFP01375 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFP01375 AC073648.4-201ENST00000442655 781 ntBASIC5.07□□□□□ -1.6
TNFP01375 AC016772.1-201ENST00000444170 1261 ntBASIC5.07□□□□□ -1.6
TNFP01375 SUMO2P1-206ENST00000445436 284 ntBASIC5.07□□□□□ -1.6
TNFP01375 KNOP1P3-201ENST00000446933 426 ntBASIC5.07□□□□□ -1.6
TNFP01375 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.07□□□□□ -1.6
TNFP01375 SNRPCP3-201ENST00000474888 476 ntBASIC5.07□□□□□ -1.6
TNFP01375 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFP01375 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TNFP01375 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.07□□□□□ -1.6
TNFP01375 OR5D2P-201ENST00000524390 911 ntBASIC5.07□□□□□ -1.6
TNFP01375 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFP01375 AC005000.1-201ENST00000536192 288 ntBASIC5.07□□□□□ -1.6
TNFP01375 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.07□□□□□ -1.6
TNFP01375 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TNFP01375 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.07□□□□□ -1.6
TNFP01375 AC005084.1-201ENST00000605160 304 ntBASIC5.07□□□□□ -1.6
TNFP01375 AP005131.7-201ENST00000610087 611 ntBASIC5.07□□□□□ -1.6
TNFP01375 AC007786.3-201ENST00000615154 596 ntBASIC5.07□□□□□ -1.6
TNFP01375 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
TNFP01375 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFP01375 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFP01375 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TNFP01375 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFP01375 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFP01375 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFP01375 AL034549.2-201ENST00000618285 3373 ntBASIC5.07□□□□□ -1.6
TNFP01375 INTS6P1-201ENST00000504674 2530 ntBASIC5.06□□□□□ -1.6
TNFP01375 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 NLRP3P1-201ENST00000622303 1785 ntBASIC5.06□□□□□ -1.6
TNFP01375 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TNFP01375 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 MIR589-201ENST00000385238 99 ntBASIC5.06□□□□□ -1.6
TNFP01375 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFP01375 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 RBMY2KP-201ENST00000418221 992 ntBASIC5.06□□□□□ -1.6
TNFP01375 RPS26P13-201ENST00000419030 330 ntBASIC5.06□□□□□ -1.6
TNFP01375 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFP01375 RPL7AP49-201ENST00000429522 581 ntBASIC5.06□□□□□ -1.6
TNFP01375 AL591438.1-201ENST00000433508 581 ntBASIC5.06□□□□□ -1.6
TNFP01375 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFP01375 NOP56P2-201ENST00000447491 769 ntBASIC5.06□□□□□ -1.6
TNFP01375 HIGD1AP8-201ENST00000453927 274 ntBASIC5.06□□□□□ -1.6
TNFP01375 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFP01375 RPS12P31-201ENST00000491419 398 ntBASIC5.06□□□□□ -1.6
TNFP01375 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFP01375 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFP01375 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFP01375 OR7E128P-201ENST00000532736 1024 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms