Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.41□□□□□ -1.54
LDLRP01130 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.4□□□□□ -1.54
LDLRP01130 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LDLRP01130 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
LDLRP01130 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRP01130 SNORA64.1-201ENST00000362600 132 ntBASIC5.4□□□□□ -1.54
LDLRP01130 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 U3.28-201ENST00000391249 210 ntBASIC5.4□□□□□ -1.54
LDLRP01130 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
LDLRP01130 AC007068.1-201ENST00000396690 844 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AL391422.1-201ENST00000402155 436 ntBASIC5.4□□□□□ -1.54
LDLRP01130 SNRPEP6-201ENST00000407465 277 ntBASIC5.4□□□□□ -1.54
LDLRP01130 RNU2-72P-201ENST00000411175 163 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRP01130 BMS1P17-202ENST00000416720 316 ntBASIC5.4□□□□□ -1.54
LDLRP01130 RPS4XP5-201ENST00000419038 768 ntBASIC5.4□□□□□ -1.54
LDLRP01130 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRP01130 AC013410.2-201ENST00000422627 201 ntBASIC5.4□□□□□ -1.54
LDLRP01130 HMGN2P27-201ENST00000427352 270 ntBASIC5.4□□□□□ -1.54
LDLRP01130 ELOCP6-201ENST00000429066 328 ntBASIC5.4□□□□□ -1.54
LDLRP01130 MTND4LP7-201ENST00000431728 294 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AL691517.1-201ENST00000440833 1235 ntBASIC5.4□□□□□ -1.54
LDLRP01130 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRP01130 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRP01130 ELOCP12-201ENST00000458706 328 ntBASIC5.4□□□□□ -1.54
LDLRP01130 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRP01130 AC008629.2-201ENST00000503783 483 ntBASIC5.4□□□□□ -1.54
LDLRP01130 NDUFA5P12-201ENST00000503796 343 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AC093763.2-201ENST00000505334 1223 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRP01130 GAPDHP71-201ENST00000511530 1003 ntBASIC5.4□□□□□ -1.54
LDLRP01130 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.4□□□□□ -1.54
LDLRP01130 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 RNU6-760P-201ENST00000516078 97 ntBASIC5.4□□□□□ -1.54
LDLRP01130 RNA5SP230-201ENST00000517039 122 ntBASIC5.4□□□□□ -1.54
LDLRP01130 SEC11B-201ENST00000518383 499 ntBASIC5.4□□□□□ -1.54
LDLRP01130 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.4□□□□□ -1.54
LDLRP01130 AC137627.1-201ENST00000545761 289 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.4□□□□□ -1.54
LDLRP01130 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRP01130 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRP01130 AC027281.1-201ENST00000574178 758 ntBASIC5.4□□□□□ -1.54
LDLRP01130 TXNP4-201ENST00000575018 310 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.4□□□□□ -1.54
LDLRP01130 IMMP1LP3-201ENST00000604197 224 ntBASIC5.4□□□□□ -1.54
LDLRP01130 Z95327.3-201ENST00000610385 572 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AC010632.3-201ENST00000611377 369 ntBASIC5.4□□□□□ -1.54
LDLRP01130 AL357562.1-201ENST00000624911 609 ntBASIC5.4□□□□□ -1.54
LDLRP01130 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.4□□□□□ -1.54
LDLRP01130 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.4□□□□□ -1.55
LDLRP01130 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
LDLRP01130 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.4□□□□□ -1.55
LDLRP01130 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
LDLRP01130 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.4□□□□□ -1.55
LDLRP01130 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.4□□□□□ -1.55
LDLRP01130 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LDLRP01130 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
LDLRP01130 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 CR382285.2-201ENST00000624662 1495 ntBASIC5.39□□□□□ -1.55
LDLRP01130 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
LDLRP01130 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.39□□□□□ -1.55
LDLRP01130 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.39□□□□□ -1.55
LDLRP01130 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
LDLRP01130 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.39□□□□□ -1.55
LDLRP01130 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 AL353625.1-202ENST00000366273 571 ntBASIC5.39□□□□□ -1.55
LDLRP01130 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 RNU2-22P-201ENST00000411266 212 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.39□□□□□ -1.55
LDLRP01130 AL445528.1-201ENST00000426330 420 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.39□□□□□ -1.55
LDLRP01130 CFL1P1-202ENST00000432948 411 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AL445928.1-201ENST00000435545 222 ntBASIC5.39□□□□□ -1.55
LDLRP01130 MTND4P15-201ENST00000437913 1033 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC023141.8-201ENST00000442554 208 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.39□□□□□ -1.55
LDLRP01130 OTX2P1-201ENST00000450956 354 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.39□□□□□ -1.55
LDLRP01130 RN7SL727P-201ENST00000482164 296 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms