Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDGFBP01127 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
PDGFBP01127 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDGFBP01127 GLULP6-201ENST00000399502 913 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AL009179.1-201ENST00000406085 265 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 NPM1P40-201ENST00000412758 733 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AL354868.1-201ENST00000417077 482 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 MTCO1P51-201ENST00000427672 1060 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AC096775.1-201ENST00000437724 448 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
PDGFBP01127 AC093720.1-201ENST00000505681 714 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 HMGB1P44-201ENST00000508597 572 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.51□□□□□ -1.53
PDGFBP01127 CYP4F27P-201ENST00000514557 494 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.51□□□□□ -1.53
PDGFBP01127 AC021006.3-201ENST00000530771 192 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.51□□□□□ -1.53
PDGFBP01127 AP006289.1-201ENST00000538089 277 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 TOMM20P2-201ENST00000540082 421 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AL110118.1-201ENST00000553543 400 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.51□□□□□ -1.53
PDGFBP01127 AC009117.1-201ENST00000563948 554 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AC007346.2-201ENST00000564816 892 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.51□□□□□ -1.53
PDGFBP01127 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.51□□□□□ -1.53
PDGFBP01127 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PDGFBP01127 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 AP001885.1-201ENST00000621658 558 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 MTCO1P15-201ENST00000529569 1526 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.51□□□□□ -1.53
PDGFBP01127 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFBP01127 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFBP01127 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 AC062029.1-202ENST00000606164 3651 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFBP01127 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFBP01127 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 Y_RNA.126-201ENST00000363382 111 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 SNORA70.2-201ENST00000364506 135 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 RNA5SP455-201ENST00000365190 119 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 RN7SKP186-201ENST00000365371 303 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 RPL17P36-201ENST00000420302 549 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFBP01127 AC068287.1-201ENST00000430283 295 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFBP01127 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDGFBP01127 AC079922.1-201ENST00000443291 359 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 AC073264.2-201ENST00000448886 166 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFBP01127 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFBP01127 RN7SL165P-201ENST00000477476 291 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.5□□□□□ -1.53
PDGFBP01127 MTND6P2-201ENST00000512226 524 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 BTF3P13-201ENST00000513224 490 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 KCTD9P4-201ENST00000526766 1166 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 AP002373.2-201ENST00000541631 1060 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFBP01127 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFBP01127 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFBP01127 AL020997.2-201ENST00000602607 184 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 AC073575.2-201ENST00000614212 627 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 AC112694.2-201ENST00000623697 768 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDGFBP01127 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDGFBP01127 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 AC097461.1-201ENST00000568928 2821 ntBASIC5.5□□□□□ -1.53
PDGFBP01127 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms