Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TTC39DP-201ENST00000416781 1688 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 AC112255.1-201ENST00000624070 2493 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 AC138907.8-201ENST00000623981 2256 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SMAD6O43541 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.59□□□□□ -1.51
SMAD6O43541 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.59□□□□□ -1.51
SMAD6O43541 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 AC010266.2-201ENST00000564741 3255 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SMAD6O43541 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.59□□□□□ -1.51
SMAD6O43541 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.59□□□□□ -1.51
SMAD6O43541 MTATP6P26-201ENST00000445926 662 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.59□□□□□ -1.51
SMAD6O43541 ATP5LP5-201ENST00000483050 299 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 MTND3P24-201ENST00000506306 329 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.59□□□□□ -1.51
SMAD6O43541 BX510359.5-201ENST00000515651 304 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.59□□□□□ -1.51
SMAD6O43541 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.59□□□□□ -1.51
SMAD6O43541 AC136777.2-201ENST00000522979 358 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.59□□□□□ -1.51
SMAD6O43541 OR5AM1P-201ENST00000532136 1032 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 AC122688.1-201ENST00000541494 223 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.59□□□□□ -1.51
SMAD6O43541 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.59□□□□□ -1.51
SMAD6O43541 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.59□□□□□ -1.51
SMAD6O43541 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.59□□□□□ -1.51
SMAD6O43541 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.59□□□□□ -1.51
SMAD6O43541 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SMAD6O43541 AC010487.1-201ENST00000594408 1172 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 ZNF92P2-201ENST00000600543 1059 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 OR4G3P-201ENST00000633500 913 ntBASIC5.59□□□□□ -1.51
SMAD6O43541 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.59□□□□□ -1.51
SMAD6O43541 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMAD6O43541 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SMAD6O43541 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.59□□□□□ -1.52
SMAD6O43541 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SMAD6O43541 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
SMAD6O43541 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SMAD6O43541 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SMAD6O43541 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
SMAD6O43541 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SMAD6O43541 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 RARSP1-201ENST00000542842 1418 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.58□□□□□ -1.52
SMAD6O43541 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMAD6O43541 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMAD6O43541 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 RNU1-146P-201ENST00000364015 165 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMAD6O43541 PEX12P1-201ENST00000400284 1048 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 OR1F12-201ENST00000402365 945 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 AL357078.2-201ENST00000416486 427 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 OR10T1P-201ENST00000424327 947 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 MRPS21P2-201ENST00000424704 264 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 MTND4LP7-201ENST00000431728 294 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.58□□□□□ -1.52
SMAD6O43541 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.58□□□□□ -1.52
SMAD6O43541 RPS26P41-201ENST00000450370 284 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 RPL7P45-201ENST00000455851 743 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AC110749.1-201ENST00000462007 357 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 ATP5G1P3-201ENST00000463301 410 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AC074386.1-201ENST00000476560 767 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 RN7SL629P-201ENST00000489622 285 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AC082651.2-201ENST00000496833 166 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.58□□□□□ -1.52
SMAD6O43541 SNORD116-30-201ENST00000516468 85 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.58□□□□□ -1.52
SMAD6O43541 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.58□□□□□ -1.52
SMAD6O43541 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 BLZF2P-201ENST00000553776 1130 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.58□□□□□ -1.52
SMAD6O43541 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.58□□□□□ -1.52
SMAD6O43541 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.58□□□□□ -1.52
SMAD6O43541 H3F3BP2-201ENST00000583907 357 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms