Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 RNA5SP46-201ENST00000362370 120 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC28A1O00337 RNU6-1320P-201ENST00000390838 107 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 RNU6-1269P-201ENST00000391139 107 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SLC28A1O00337 CXADRP1-201ENST00000398098 1095 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 RPL21P67-201ENST00000402896 478 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 DHFRP5-201ENST00000406944 564 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 AC099535.1-201ENST00000408928 371 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 SLC20A1P1-201ENST00000413906 956 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
SLC28A1O00337 Z93019.1-201ENST00000416450 973 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC28A1O00337 FTLP19-201ENST00000433300 394 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 GSTM5P1-201ENST00000434751 660 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC28A1O00337 FMO7P-201ENST00000436045 768 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC28A1O00337 AC019185.1-201ENST00000442718 389 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 EEF1B2P6-201ENST00000445713 673 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC28A1O00337 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC28A1O00337 RNU6-599P-201ENST00000459383 107 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 RNU6-1193P-201ENST00000459461 107 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 RPL15P21-201ENST00000495592 567 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.16□□□□□ -1.58
SLC28A1O00337 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC28A1O00337 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC28A1O00337 AC040958.1-201ENST00000561102 201 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 MTND2P13-201ENST00000577438 1039 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC28A1O00337 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC28A1O00337 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC28A1O00337 AC012213.4-201ENST00000606457 354 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 CXADRP3-202ENST00000617265 1100 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 MIR6839-201ENST00000620425 113 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 RNU6-368P-201ENST00000620928 107 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 RNU6-538P-201ENST00000622329 107 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC28A1O00337 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC28A1O00337 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC28A1O00337 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.15□□□□□ -1.58
SLC28A1O00337 AC007342.5-201ENST00000571340 2142 ntBASIC5.15□□□□□ -1.58
SLC28A1O00337 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC28A1O00337 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC28A1O00337 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SLC28A1O00337 RPL12P9-201ENST00000412942 488 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AL596448.1-201ENST00000415024 392 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 BMS1P17-202ENST00000416720 316 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC28A1O00337 SRSF1P1-201ENST00000424058 520 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SLC28A1O00337 DSTNP5-201ENST00000427921 523 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC28A1O00337 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 AC105399.1-202ENST00000447303 205 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 RPL31P20-201ENST00000449593 360 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 DNAJB5P1-201ENST00000454004 806 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC28A1O00337 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC28A1O00337 CBX1P5-201ENST00000475330 559 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 OR11I1P-201ENST00000486033 954 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 OR9N1P-201ENST00000491296 333 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 MYL12BP2-201ENST00000503948 512 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC28A1O00337 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC28A1O00337 AP004607.2-201ENST00000533949 322 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AC078878.1-201ENST00000539832 958 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 NANOGNBP2-201ENST00000544753 553 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC28A1O00337 AC022387.2-201ENST00000604050 448 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AC079791.1-201ENST00000605356 973 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC28A1O00337 MIR6071-201ENST00000616741 78 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 AC015722.2-201ENST00000622210 551 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC28A1O00337 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC28A1O00337 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC28A1O00337 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SLC28A1O00337 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SLC28A1O00337 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SLC28A1O00337 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC28A1O00337 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC28A1O00337 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.15□□□□□ -1.59
SLC28A1O00337 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms