Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDLIM1O00151 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDLIM1O00151 AC100757.1-201ENST00000616872 1835 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 AL356489.2-201ENST00000566968 3528 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDLIM1O00151 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDLIM1O00151 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDLIM1O00151 AC023490.2-201ENST00000359859 470 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 AL589994.1-201ENST00000404962 340 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 RPSAP35-201ENST00000413753 818 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 AC007738.1-201ENST00000413892 348 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 AL034379.1-201ENST00000423216 253 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 AL512637.1-201ENST00000439523 1231 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 CYCSP24-201ENST00000445119 316 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM1O00151 AC093166.4-201ENST00000457867 318 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 AC011476.1-201ENST00000466725 307 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 IGBP1P4-201ENST00000503202 879 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM1O00151 AC114781.3-201ENST00000512083 142 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 TCP11X3P-202ENST00000514289 1254 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 EIF3KP3-201ENST00000514461 639 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 RFPL4AP3-201ENST00000515267 345 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM1O00151 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 AC025857.1-201ENST00000525252 377 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.19□□□□□ -1.58
PDLIM1O00151 MTND2P17-201ENST00000550281 688 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM1O00151 QTRT1P1-201ENST00000604344 1078 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 AC096586.2-201ENST00000610260 441 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM1O00151 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDLIM1O00151 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 PWAR1-201ENST00000624188 2414 ntBASIC5.19□□□□□ -1.58
PDLIM1O00151 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PDLIM1O00151 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
PDLIM1O00151 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM1O00151 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM1O00151 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM1O00151 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM1O00151 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 RN7SKP224-201ENST00000364140 325 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM1O00151 OR7E101P-201ENST00000400428 513 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 RN7SKP29-201ENST00000410957 272 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 RIMKLBP2-201ENST00000424737 654 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 BX323845.3-201ENST00000428215 527 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 RPL7AP49-201ENST00000429522 581 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AL591438.1-201ENST00000433508 581 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM1O00151 IGBP1P3-201ENST00000447449 1000 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AC090804.1-201ENST00000448870 490 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AL445433.1-201ENST00000457507 257 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 ACA64.1-201ENST00000459171 127 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM1O00151 RPS17P15-201ENST00000475609 349 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AC099521.1-201ENST00000482557 334 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC090568.1-201ENST00000509499 856 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC100784.1-201ENST00000522790 310 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM1O00151 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
PDLIM1O00151 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC100767.2-201ENST00000604840 693 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AC015982.1-201ENST00000608113 465 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AL158196.1-201ENST00000616786 434 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AC015660.5-201ENST00000623238 564 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 AC067931.1-201ENST00000624190 671 ntBASIC5.18□□□□□ -1.58
PDLIM1O00151 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC026523.2-201ENST00000625039 7739 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms