Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC006484.1-201ENST00000435086 1884 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 RNA5SP234-201ENST00000363916 119 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 RNU6-1251P-201ENST00000364502 107 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 RNU6-1263P-201ENST00000384601 106 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 OR10T1P-201ENST00000424327 947 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 ARAFP2-201ENST00000440565 559 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AL157884.3-201ENST00000448273 1184 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC011225.1-201ENST00000457751 369 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 RN7SL515P-201ENST00000463999 297 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC025181.1-201ENST00000477507 416 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 RPS4XP1-201ENST00000482189 787 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 RN7SL30P-201ENST00000488416 306 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 RNU6-491P-201ENST00000516099 110 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 MTND2P13-201ENST00000577438 1039 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AC015802.5-201ENST00000607478 399 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AL021707.7-201ENST00000607991 416 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 AL162233.1-201ENST00000620014 944 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 MUC2-202ENST00000613187 4845 ntBASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA3F8WFD2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC235565.1-201ENST00000456962 1325 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC022417.1-201ENST00000624768 1303 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AL121886.1-201ENST00000358609 435 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RNU1-19P-201ENST00000363306 165 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 SNORA74A-201ENST00000364089 198 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RNU1-77P-201ENST00000390868 162 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RPL10P10-201ENST00000403509 664 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RNU4-34P-201ENST00000410431 124 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RNF10P1-201ENST00000418589 369 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC021876.1-201ENST00000425959 359 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 ARL4AP4-201ENST00000434170 518 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 CYCSP6-201ENST00000434498 302 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 CYCSP12-201ENST00000437729 300 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RBMY2TP-201ENST00000451162 947 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC108751.3-201ENST00000461814 1020 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 COPS8P2-201ENST00000473228 627 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 ATP5LP5-201ENST00000483050 299 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC091544.1-201ENST00000484702 348 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 OR5M14P-201ENST00000506803 618 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 GLUD1P3-202ENST00000508551 200 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 SNORA70.11-201ENST00000515987 138 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 563.4 ms