Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC096921.1-201ENST00000411661 375 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 GABARAPL3-201ENST00000412799 354 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 RBMY2TP-201ENST00000451162 947 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 RPL7P45-201ENST00000455851 743 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 RN7SL188P-201ENST00000469842 285 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 HMGB3P14-201ENST00000494195 599 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 GAPDHP62-201ENST00000515313 990 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 IGLV3-24-201ENST00000517477 197 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 EIF1AXP2-201ENST00000555940 413 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC019322.1-201ENST00000571869 389 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC136428.4-201ENST00000634254 1155 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 AC079776.5-201ENST00000641920 211 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 PCAT14-202ENST00000627127 3935 ntBASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA2E9PIF3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 OR4F13P-202ENST00000560066 2054 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC107021.2-201ENST00000567714 2095 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 U3.10-201ENST00000364459 214 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC005042.1-201ENST00000393397 800 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 SPTLC1P2-201ENST00000407089 121 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 HIGD1AP14-201ENST00000507617 282 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC111000.6-201ENST00000514471 709 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 CDC42P3-201ENST00000518493 633 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC022784.5-201ENST00000522241 437 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 OR8Q1P-201ENST00000526467 655 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 H3F3BP2-201ENST00000583907 357 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AL512329.2-201ENST00000607350 548 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AL118522.2-201ENST00000616045 615 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC016769.4-201ENST00000616893 535 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 MT-RNR2-201ENST00000387347 1559 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 PABPC1P6-201ENST00000445594 1829 ntBASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA2E9PIF3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
NPIPA2E9PIF3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA2E9PIF3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms