Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC004477.3-201ENST00000614061 590 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AL445528.2-201ENST00000620582 470 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC025262.3-201ENST00000623666 360 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC090506.2-201ENST00000624521 419 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AL356118.1-201ENST00000635272 1078 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC091305.2-201ENST00000624049 1576 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 TCP1P3-201ENST00000414406 1498 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 OR52B3P-201ENST00000314715 928 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 MIR375-201ENST00000362103 64 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 RNU6-1000P-201ENST00000391066 106 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 NPM1P38-201ENST00000403835 865 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AL512661.1-201ENST00000434586 1253 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC005297.1-201ENST00000444765 862 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC090804.1-201ENST00000448870 490 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AL035090.1-201ENST00000454835 332 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 SNORA43.3-201ENST00000517240 103 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AL158211.1-201ENST00000566763 763 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 RN7SL290P-201ENST00000578661 300 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC134669.1-201ENST00000581275 672 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC108865.2-201ENST00000606881 432 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC112503.2-201ENST00000609005 552 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC008147.4-201ENST00000617570 1204 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC244100.4-201ENST00000617747 388 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC015722.2-201ENST00000622210 551 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC090617.9-201ENST00000623751 147 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 TMEM30CP-203ENST00000637814 1035 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC083837.1-201ENST00000565297 2994 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 AC114786.1-201ENST00000512892 1415 ntBASIC5.57□□□□□ -1.52
TCRBV7S3A2A0A539 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AC003985.2-201ENST00000562268 1669 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AC004158.1-201ENST00000564508 4319 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 RAD1P1-201ENST00000231383 813 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 RNA5SP241-201ENST00000391326 114 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AL606495.1-201ENST00000422100 813 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 DSTNP5-201ENST00000427921 523 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 BX119321.1-201ENST00000428912 797 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AC092106.1-201ENST00000444291 373 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AL450023.1-201ENST00000450868 751 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AC021087.2-201ENST00000504656 1203 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 MTCO3P27-201ENST00000514397 196 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 RNA5SP271-201ENST00000516700 88 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AP003355.1-201ENST00000518956 587 ntBASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TCRBV7S3A2A0A539 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 372.5 ms