Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 AP002505.2-201ENST00000623585 696 ntBASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 CASC19-221ENST00000641309 1382 ntBASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 AL590763.1-201ENST00000398297 1545 ntBASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRBV5-4A0A0C4DH59 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC004158.1-201ENST00000564508 4319 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 MIR223-201ENST00000385204 110 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AL390316.1-201ENST00000406279 553 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AL355433.1-201ENST00000422804 300 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 VTI1BP4-201ENST00000427516 527 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC005033.1-201ENST00000428904 813 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 RPL7AP61-201ENST00000443410 636 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 KNOP1P3-201ENST00000446933 426 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 OR52Y1P-201ENST00000452418 828 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 DEFB109A-201ENST00000482450 265 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC005412.2-201ENST00000492004 341 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 HIGD1AP14-201ENST00000507617 282 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC011411.1-201ENST00000509592 876 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 RNA5SP230-201ENST00000517039 122 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC100784.1-201ENST00000522790 310 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC025423.2-201ENST00000537570 439 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC004825.1-201ENST00000555068 586 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 OR11J2P-201ENST00000555298 907 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AP005432.1-201ENST00000580891 3485 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 BNIP3P35-201ENST00000604530 490 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC092944.2-201ENST00000605443 889 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC018695.5-201ENST00000605872 315 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC096586.2-201ENST00000610260 441 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TRBV5-4A0A0C4DH59 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 ZNF733P-202ENST00000444809 1573 ntBASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 RN7SKP16-201ENST00000410180 299 ntBASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 AL139148.1-201ENST00000427122 680 ntBASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 MTCYBP14-201ENST00000457471 715 ntBASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC021660.1-201ENST00000465006 554 ntBASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 BX284632.1-201ENST00000478218 541 ntBASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.09□□□□□ -1.59
TRBV5-4A0A0C4DH59 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms