Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 UBE2V1P12-201ENST00000503954 474 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 SCARNA6.1-201ENST00000516989 238 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC008429.4-201ENST00000521201 182 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 MTND1P24-201ENST00000552175 861 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC090651.1-201ENST00000567865 634 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 TXNP4-201ENST00000575018 310 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC025857.2-201ENST00000602711 238 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC004908.3-201ENST00000610248 625 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 SDR42E1P1-201ENST00000611327 477 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC008115.3-201ENST00000614874 549 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC245389.2-201ENST00000616023 576 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC242843.1-201ENST00000618702 573 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AP003476.1-201ENST00000623984 516 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC004808.1-201ENST00000627671 721 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AC000095.2-202ENST00000637415 154 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 PROS2P-201ENST00000474651 1951 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 MTCO1P4-201ENST00000520516 1409 ntBASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SSX2IPQ9Y2D8 AP005435.3-201ENST00000531260 3198 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 MIR105-2-201ENST00000385083 81 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 MIR1178-201ENST00000408396 91 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 RPS3AP25-201ENST00000411660 793 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 NPM1P4-201ENST00000414095 812 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AL596448.1-201ENST00000415024 392 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 OR13Z1P-201ENST00000416141 834 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 EEF1B2P6-201ENST00000445713 673 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 FRG2FP-204ENST00000453982 852 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 RPS3AP53-201ENST00000454716 778 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AL133445.1-201ENST00000467051 452 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 NPM1P17-201ENST00000479221 602 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 OR9N1P-202ENST00000494289 481 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC098862.1-201ENST00000504991 413 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC103833.1-201ENST00000517442 172 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 NRBF2P4-201ENST00000520874 850 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 YWHAZP1-201ENST00000556286 722 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 GARSP1-201ENST00000570895 719 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC010487.1-201ENST00000594408 1172 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC048344.4-201ENST00000619744 527 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 AC079298.2-201ENST00000623885 459 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 OR6C71P-202ENST00000641886 1107 ntBASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX2IPQ9Y2D8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.21□□□□□ -1.41
SSX2IPQ9Y2D8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.21□□□□□ -1.41
SSX2IPQ9Y2D8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.21□□□□□ -1.41
SSX2IPQ9Y2D8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.21□□□□□ -1.41
SSX2IPQ9Y2D8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.21□□□□□ -1.41
SSX2IPQ9Y2D8 SAMM50P1-201ENST00000455403 1399 ntBASIC6.21□□□□□ -1.41
SSX2IPQ9Y2D8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SSX2IPQ9Y2D8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms