Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC092376.2-201ENST00000622621 4116 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 MRRFP1-201ENST00000435941 1675 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 OR55B1P-203ENST00000641518 2602 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 RPL23P2-201ENST00000320371 421 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AL358178.1-201ENST00000407698 397 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AC108075.1-201ENST00000424692 529 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 HMGN2P27-201ENST00000427352 270 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 RPL12P17-201ENST00000432393 498 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 NDUFB4P8-201ENST00000435351 367 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 PTMAP6-201ENST00000439110 327 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AC083899.1-201ENST00000454465 3819 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 RN7SL188P-201ENST00000469842 285 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AC092754.1-201ENST00000472975 479 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 OR11J2P-201ENST00000555298 907 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AC005341.1-201ENST00000571086 708 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 AC069307.1-201ENST00000602820 447 ntBASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLIP2Q9UDT6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 SNORA70-201ENST00000384436 135 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 AC005033.1-201ENST00000428904 813 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 GAPDHP25-201ENST00000447061 1001 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 RPS18P6-201ENST00000476880 458 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 AC135999.1-201ENST00000478962 479 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 AC015864.1-201ENST00000496512 544 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 RNA5SP373-201ENST00000517271 95 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 AC127381.1-201ENST00000555979 939 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 AC009237.13-201ENST00000603193 276 ntBASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP2Q9UDT6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 AC093655.2-201ENST00000425735 631 ntBASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 RPL32P9-201ENST00000487963 407 ntBASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 RPL15P21-201ENST00000495592 567 ntBASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 OR8G3P-201ENST00000533406 921 ntBASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 AC009852.2-201ENST00000567898 485 ntBASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 OR9K1P-202ENST00000641111 3217 ntBASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 AL078621.3-201ENST00000623707 2042 ntBASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP2Q9UDT6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms