Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 XKRY2-202ENST00000623874 1581 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 XKRY-202ENST00000624960 1581 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 KARSP1-201ENST00000451871 1752 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 OR4G1P-202ENST00000641173 1788 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 U3.3-201ENST00000362986 216 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 RN7SKP15-201ENST00000364742 309 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 SNORA67-201ENST00000384423 137 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 MIR143-201ENST00000385300 106 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AL513325.1-201ENST00000417716 1034 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 HMGN2P27-201ENST00000427352 270 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 RPS26P41-201ENST00000450370 284 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC007386.1-201ENST00000455212 582 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 EIF3LP3-201ENST00000495197 822 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 RPS4XP20-201ENST00000505751 772 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC097173.1-201ENST00000505862 819 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC018695.5-201ENST00000605872 315 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AP005131.7-201ENST00000610087 611 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC108359.1-201ENST00000616451 1211 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 CYP4F35P-202ENST00000636121 390 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC004817.4-201ENST00000602396 3625 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 AC073136.1-201ENST00000449426 2884 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS29Q9UBQ0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
VPS29Q9UBQ0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.96□□□□□ -1.61
VPS29Q9UBQ0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 RPL12P18-201ENST00000437175 325 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 Z92846.1-201ENST00000456203 268 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 GTF2F2P1-201ENST00000511083 675 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 RNU6-1334P-201ENST00000516032 105 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AC027026.1-201ENST00000532323 742 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AC069307.1-201ENST00000602820 447 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 BNIP3P35-201ENST00000604530 490 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 OR51C1P-201ENST00000608504 942 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 AC114947.2-201ENST00000565748 2125 ntBASIC4.96□□□□□ -1.62
VPS29Q9UBQ0 MRRFP1-201ENST00000435941 1675 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms