Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEMA4BQ9NPR2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEMA4BQ9NPR2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEMA4BQ9NPR2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEMA4BQ9NPR2 AC018628.1-201ENST00000624147 3819 ntBASIC5.6□□□□□ -1.51
SEMA4BQ9NPR2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEMA4BQ9NPR2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SEMA4BQ9NPR2 AC079298.1-201ENST00000625026 1619 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 SAMMSON-210ENST00000641260 1308 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 ZNF90P1-201ENST00000480493 1951 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC027088.4-201ENST00000611559 1947 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 RNA5SP514-201ENST00000363717 111 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 RNU6-1000P-201ENST00000391066 106 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AF228730.1-201ENST00000397972 663 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 TATDN1P1-201ENST00000414123 891 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 RPA2P2-201ENST00000419698 796 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC138761.5-201ENST00000433967 325 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 RPS23P9-201ENST00000448848 438 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 CFL1P4-201ENST00000451536 498 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC128716.1-201ENST00000475129 166 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC008410.1-201ENST00000483777 339 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 RPS3AP15-201ENST00000483874 781 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 RPS7P6-201ENST00000485777 579 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 RN7SL57P-201ENST00000493687 290 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC105233.1-201ENST00000498840 781 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC090568.1-201ENST00000509499 856 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 BTG4P1-201ENST00000510421 183 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 GAPDHP71-201ENST00000511530 1003 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 IGHV3-63-201ENST00000518422 341 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 TRIM77BP-201ENST00000524985 1119 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AP004609.2-201ENST00000532177 190 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC006530.1-201ENST00000555980 571 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AL049838.1-201ENST00000563647 981 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC090236.2-201ENST00000587933 1101 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 NANOGP3-201ENST00000605855 286 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC108865.2-201ENST00000606881 432 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 AC004777.1-201ENST00000624317 287 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 TMEM30CP-203ENST00000637814 1035 ntBASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEMA4BQ9NPR2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SEMA4BQ9NPR2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SEMA4BQ9NPR2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
SEMA4BQ9NPR2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.52
SEMA4BQ9NPR2 BRAFP1-201ENST00000445336 2703 ntBASIC5.59□□□□□ -1.52
SEMA4BQ9NPR2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.59□□□□□ -1.52
SEMA4BQ9NPR2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SEMA4BQ9NPR2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
SEMA4BQ9NPR2 AC106754.1-201ENST00000562632 1513 ntBASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 RNU6-792P-201ENST00000363490 107 ntBASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEMA4BQ9NPR2 MIR130A-201ENST00000385274 89 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms