Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RN7SL25P-201ENST00000583862 260 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC006116.6-201ENST00000593258 1103 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AL159169.3-201ENST00000608871 561 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC006566.1-201ENST00000608943 513 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AL157786.1-207ENST00000627771 695 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC073869.7-201ENST00000640874 297 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 OR5H6-203ENST00000642105 978 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSU72Q9NP77 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC117409.1-201ENST00000470499 1310 ntBASIC6.65□□□□□ -1.35
SSU72Q9NP77 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.65□□□□□ -1.35
SSU72Q9NP77 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SSU72Q9NP77 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.65□□□□□ -1.35
SSU72Q9NP77 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.35
SSU72Q9NP77 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SSU72Q9NP77 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
SSU72Q9NP77 AL022323.4-201ENST00000623980 13120 ntBASIC6.65□□□□□ -1.35
SSU72Q9NP77 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
SSU72Q9NP77 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.65□□□□□ -1.35
SSU72Q9NP77 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.65□□□□□ -1.35
SSU72Q9NP77 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SSU72Q9NP77 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AP003486.1-201ENST00000525716 3994 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC034229.2-201ENST00000566945 2508 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 Y_RNA.11-201ENST00000362375 109 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 RNU6-1042P-201ENST00000384204 107 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 RPS27AP11-201ENST00000402798 447 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 HMGA1P8-201ENST00000414130 321 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 RPS26P38-201ENST00000414476 348 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC007365.2-201ENST00000428806 458 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 RPL29P7-201ENST00000440227 457 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 BX005266.3-201ENST00000443013 1075 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 COX6CP12-201ENST00000446748 202 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 MTND5P20-201ENST00000448677 143 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC114728.1-201ENST00000488289 483 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC091874.2-201ENST00000505889 720 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC098799.2-201ENST00000509466 868 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 NACAP6-201ENST00000509572 622 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 OR5M4P-201ENST00000529436 925 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC104383.1-201ENST00000530297 370 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 OR7E161P-201ENST00000533722 967 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AP003115.1-201ENST00000569849 463 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 MIR4666A-201ENST00000580160 79 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC009220.3-201ENST00000604318 586 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC012360.2-201ENST00000609349 391 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AC004009.2-201ENST00000623016 728 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 ELF2P3-201ENST00000445099 1506 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSU72Q9NP77 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 AL669831.5-218ENST00000591702 1873 ntBASIC6.64□□□□□ -1.35
SSU72Q9NP77 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.64□□□□□ -1.35
SSU72Q9NP77 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms