Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 OR51C1P-201ENST00000608504 942 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC126915.2-201ENST00000610957 190 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 WBP1LP8-201ENST00000617401 327 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC068870.2-201ENST00000620635 389 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 BCORP1-203ENST00000513194 5093 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 RN7SKP185-201ENST00000362813 326 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 MIR765-201ENST00000390226 114 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 HMGB3P10-201ENST00000434734 572 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AL645937.3-201ENST00000453647 936 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 RN7SL197P-201ENST00000466981 299 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 CBX1P5-201ENST00000475330 559 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 RPL7AP6-201ENST00000477943 801 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 RN7SL708P-201ENST00000580952 299 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC090510.2-201ENST00000617465 629 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AP002505.2-201ENST00000623585 696 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC138965.3-201ENST00000623875 498 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 AC018809.2-201ENST00000602436 3823 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 MAPK10-338ENST00000641647 3362 ntBASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF3Q9HD45 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC002525.1-201ENST00000624392 1622 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 RNA5SP339-201ENST00000390987 122 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 RN7SKP125-201ENST00000410481 302 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 SUMO2P1-206ENST00000445436 284 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC023271.1-201ENST00000445936 1090 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC105399.1-202ENST00000447303 205 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 RPS18P6-201ENST00000476880 458 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC022832.1-201ENST00000530718 645 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms