Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 RPL29P23-201ENST00000486188 442 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 RN7SL193P-201ENST00000491708 276 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 HAUS1P1-201ENST00000505275 832 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AC112484.3-201ENST00000505910 329 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AC007956.1-201ENST00000555623 542 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AC027281.1-201ENST00000574178 758 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 SNX6P1-201ENST00000601728 1224 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AC138473.1-201ENST00000605717 526 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AL356274.1-201ENST00000617064 410 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AP000648.2-201ENST00000624182 404 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 5S_rRNA.29-201ENST00000641250 107 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 AC073869.8-201ENST00000641806 335 ntBASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SND1-IT1Q9HBX3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.59□□□□□ -1.84
SND1-IT1Q9HBX3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC010329.2-201ENST00000595195 2737 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AP001642.1-201ENST00000624727 2117 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 RNA5SP500-201ENST00000364486 119 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 CXADRP1-201ENST00000398098 1095 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC007161.1-204ENST00000423039 460 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AL139158.1-201ENST00000424719 340 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 BX119321.1-201ENST00000428912 797 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 VN1R110P-201ENST00000438988 971 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC064862.5-201ENST00000440618 334 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AL356121.1-201ENST00000442911 156 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AL589765.3-201ENST00000446084 462 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 CCRL1P1-201ENST00000449542 1053 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC069277.2-201ENST00000454211 432 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 RPS17P15-201ENST00000475609 349 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 RN7SL583P-201ENST00000475692 287 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 SNRPCP11-201ENST00000492453 205 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 NIFKP7-201ENST00000503365 834 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 IGKV3D-25-201ENST00000519599 235 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC022360.1-201ENST00000521058 340 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 OR10D4P-201ENST00000525892 951 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC084033.1-201ENST00000550830 633 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AL049874.4-201ENST00000557593 255 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 OR1E3-201ENST00000575608 948 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC022884.2-201ENST00000578535 580 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms