Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 RNU4-68P-201ENST00000364314 141 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 SNORD116-8-201ENST00000384365 95 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL157702.1-201ENST00000398764 426 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 GTF2IP3-201ENST00000433887 494 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC112492.1-201ENST00000449607 712 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL133351.3-201ENST00000454998 193 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 NDUFA5P5-201ENST00000468361 342 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC097486.1-201ENST00000515331 210 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 RNA5SP206-201ENST00000516703 121 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 MTND4P33-201ENST00000556706 766 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL845552.1-201ENST00000556820 323 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC007346.2-201ENST00000564816 892 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AGGF1P6-201ENST00000569213 976 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC079610.2-201ENST00000604818 690 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC008555.7-201ENST00000605008 583 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC024060.1-201ENST00000607052 494 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL359513.1-201ENST00000614364 557 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC139792.2-201ENST00000624218 587 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AC137056.2-201ENST00000624055 1958 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AP002512.4-202ENST00000641599 4530 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC024651.2-201ENST00000562480 2098 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC140479.2-201ENST00000421567 3130 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RNA5SP375-201ENST00000362975 119 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RNA5SP346-201ENST00000363541 121 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RNA5SP77-201ENST00000365394 120 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RPL7P27-201ENST00000403775 720 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RNU4-22P-201ENST00000411058 166 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 MTCYBP7-201ENST00000419540 1134 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC099782.1-201ENST00000425889 474 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC069154.1-201ENST00000432914 542 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 LDHAP2-201ENST00000437325 985 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 KATNBL1P3-201ENST00000443475 909 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms