Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 SNORA66-201ENST00000384792 133 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 AC007064.3-201ENST00000422608 359 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 AC091153.1-201ENST00000466297 402 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 AC011005.3-201ENST00000491624 395 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 IGKV2D-10-201ENST00000520194 281 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 RN7SL690P-201ENST00000582087 240 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 AL512782.1-201ENST00000603093 364 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 AL034374.2-201ENST00000605281 548 ntBASIC7.82□□□□□ -1.16
SCAPERQ9BY12 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SCAPERQ9BY12 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC104964.3-201ENST00000606115 2860 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 RNA5SP479-201ENST00000364858 117 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 BX679664.2-201ENST00000439282 283 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 ATP6V0E1P2-201ENST00000441771 245 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AL137845.2-201ENST00000444292 988 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC111000.3-201ENST00000508057 576 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC091912.1-201ENST00000511351 248 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC006427.1-201ENST00000514359 712 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 GAPDHP62-201ENST00000515313 990 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC134698.5-201ENST00000519444 336 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 PARP1P2-201ENST00000556806 195 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AC022893.2-201ENST00000564832 3296 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 AL033543.1-201ENST00000623440 13454 ntBASIC7.81□□□□□ -1.16
SCAPERQ9BY12 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.81□□□□□ -1.16
SCAPERQ9BY12 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 HMGB3P7-201ENST00000400214 611 ntBASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 RPS27AP7-201ENST00000422792 455 ntBASIC7.8□□□□□ -1.16
SCAPERQ9BY12 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 RN7SL244P-201ENST00000493405 297 ntBASIC7.8□□□□□ -1.16
SCAPERQ9BY12 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 OR4A43P-201ENST00000532938 908 ntBASIC7.8□□□□□ -1.16
SCAPERQ9BY12 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AC011453.2-201ENST00000603737 729 ntBASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AL353729.2-201ENST00000605859 1249 ntBASIC7.8□□□□□ -1.16
SCAPERQ9BY12 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCAPERQ9BY12 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 Y_RNA.126-201ENST00000363382 111 ntBASIC7.79□□□□□ -1.16
SCAPERQ9BY12 RPS3AP23-201ENST00000401762 784 ntBASIC7.79□□□□□ -1.16
SCAPERQ9BY12 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 snoU13.1-201ENST00000459157 104 ntBASIC7.79□□□□□ -1.16
SCAPERQ9BY12 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.79□□□□□ -1.16
SCAPERQ9BY12 AP002981.1-201ENST00000517692 975 ntBASIC7.79□□□□□ -1.16
SCAPERQ9BY12 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms