Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC091953.3-201ENST00000623220 236 ntBASIC7.29□□□□□ -1.24
CCDC7Q96M83 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CCDC7Q96M83 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC7Q96M83 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC7Q96M83 AP002512.4-202ENST00000641599 4530 ntBASIC7.29□□□□□ -1.24
CCDC7Q96M83 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC7Q96M83 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC7Q96M83 DNM1P47-203ENST00000571780 12667 ntBASIC7.28□□□□□ -1.24
CCDC7Q96M83 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC7Q96M83 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC7Q96M83 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 RNU4-4P-201ENST00000364588 130 ntBASIC7.28□□□□□ -1.24
CCDC7Q96M83 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC7Q96M83 AC093162.1-201ENST00000419682 124 ntBASIC7.28□□□□□ -1.24
CCDC7Q96M83 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 AC083982.1-201ENST00000485679 344 ntBASIC7.28□□□□□ -1.24
CCDC7Q96M83 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 AC092490.3-201ENST00000545370 572 ntBASIC7.28□□□□□ -1.24
CCDC7Q96M83 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 MIR6810-201ENST00000622701 70 ntBASIC7.28□□□□□ -1.24
CCDC7Q96M83 AC091932.2-201ENST00000623014 291 ntBASIC7.28□□□□□ -1.24
CCDC7Q96M83 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC7Q96M83 CASC19-281ENST00000642118 1554 ntBASIC7.27□□□□□ -1.25
CCDC7Q96M83 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CCDC7Q96M83 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC7Q96M83 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC7Q96M83 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CCDC7Q96M83 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
CCDC7Q96M83 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC7Q96M83 COX5BP7-201ENST00000414780 274 ntBASIC7.27□□□□□ -1.25
CCDC7Q96M83 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC7Q96M83 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC7Q96M83 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC7Q96M83 MIR4480-201ENST00000582492 71 ntBASIC7.27□□□□□ -1.25
CCDC7Q96M83 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC7Q96M83 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC7Q96M83 SMG1P7-201ENST00000565246 2704 ntBASIC7.27□□□□□ -1.25
CCDC7Q96M83 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC7Q96M83 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC7Q96M83 RNA5SP90-201ENST00000364801 99 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 HSPA8P15-201ENST00000401676 786 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 RPS11P7-201ENST00000442125 465 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC097173.1-201ENST00000505862 819 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 OR51K1P-201ENST00000510214 950 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 OR5AZ1P-201ENST00000527448 943 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC134349.2-201ENST00000535136 910 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC024940.3-201ENST00000538551 316 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC011447.4-201ENST00000587562 111 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC7Q96M83 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC7Q96M83 AP000550.3-201ENST00000637734 379 ntBASIC7.26□□□□□ -1.25
CCDC7Q96M83 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CCDC7Q96M83 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC7Q96M83 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 RN7SKP104-201ENST00000362605 328 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 AC007618.1-201ENST00000366455 732 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 FAR2P2-201ENST00000413041 594 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 FAR2P4-202ENST00000425399 584 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 HMGB1P32-201ENST00000425971 565 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 RPS4XP16-201ENST00000427198 791 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 Z92846.1-201ENST00000456203 268 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 AC002075.1-201ENST00000457396 676 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 RPS3AP41-201ENST00000462701 778 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 AC093890.1-201ENST00000502554 540 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 ELOCP28-201ENST00000590044 317 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms