Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 VN1R110P-201ENST00000438988 971 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 EEF1B2P3-201ENST00000447718 678 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC009963.3-201ENST00000458090 486 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC009120.1-201ENST00000493458 473 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 IGLV3-24-201ENST00000517477 197 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC007956.1-201ENST00000555623 542 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC090888.2-201ENST00000559765 1144 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AP000919.1-202ENST00000581139 1264 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC008507.3-201ENST00000585753 472 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 RPL12P48-201ENST00000605620 304 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC005021.1-201ENST00000608730 355 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AP001437.1-201ENST00000608783 456 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC009039.2-201ENST00000624524 529 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 ABCC13-202ENST00000463099 3842 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 LYARP1-201ENST00000436977 1501 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AL592429.1-201ENST00000403909 1473 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 RNU6-298P-201ENST00000390888 96 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 U3.28-201ENST00000391249 210 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 GSTA12P-201ENST00000402398 508 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 RPS6P23-201ENST00000413224 722 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 UBE2V1P9-201ENST00000414760 368 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC115285.1-201ENST00000424879 736 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 FO393414.1-201ENST00000428697 1184 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 BX119904.1-201ENST00000432026 348 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 MTND2P5-201ENST00000432656 1006 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AL035246.1-201ENST00000433554 1255 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 NPM1P18-201ENST00000434232 732 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 NANOGP9-201ENST00000439890 892 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 LINC02210-201ENST00000444561 288 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 SNORD125-201ENST00000459538 96 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 RPL21P18-201ENST00000469899 480 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AL122020.1-201ENST00000472287 459 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 CBX1P5-201ENST00000475330 559 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 RPL9P15-201ENST00000491096 532 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 BUD31P1-201ENST00000521828 359 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AP001636.2-201ENST00000525517 696 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 DUXAP5-201ENST00000529668 529 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms