Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 AL355488.2-201ENST00000609909 2850 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 Z98755.1-201ENST00000407015 1384 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 BX284613.1-201ENST00000452221 1641 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 SNORA70.2-201ENST00000364506 135 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 RNU1-74P-201ENST00000384108 171 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC004690.1-201ENST00000418216 328 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC069213.2-201ENST00000420238 366 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 OR7E125P-201ENST00000443450 846 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC011005.3-201ENST00000491624 395 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 SEPT10P1-201ENST00000517342 1162 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNED1Q8TER0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC018558.5-201ENST00000565840 952 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC020910.2-201ENST00000603635 610 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC009027.1-201ENST00000604510 479 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AL162431.4-201ENST00000604674 411 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 AC003973.3-201ENST00000624863 2822 ntBASIC6.28□□□□□ -1.4
SNED1Q8TER0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.28□□□□□ -1.4
SNED1Q8TER0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNED1Q8TER0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNED1Q8TER0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SNED1Q8TER0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 RPS16P5-201ENST00000406501 404 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 RPS29P10-201ENST00000439197 166 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 AL354714.3-201ENST00000447284 493 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC234781.3-201ENST00000452540 973 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC009963.2-201ENST00000453431 138 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC020898.1-201ENST00000474167 787 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC097173.1-201ENST00000505862 819 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 RNA5SP392-201ENST00000516905 112 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AL512782.1-201ENST00000603093 364 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC099654.6-201ENST00000636487 512 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC004076.2-201ENST00000620532 3323 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 AL355834.1-201ENST00000556602 3965 ntBASIC6.27□□□□□ -1.41
SNED1Q8TER0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SNED1Q8TER0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNED1Q8TER0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SNED1Q8TER0 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SNED1Q8TER0 OR5M12P-201ENST00000423388 929 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 DNAJC19P7-201ENST00000428811 344 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 IGHV5-78-201ENST00000450948 295 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 RPS23P7-201ENST00000466210 444 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 AC006967.1-201ENST00000467608 589 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 RN7SL814P-201ENST00000487715 300 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms