Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC104581.5-201ENST00000624171 7141 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC007114.2-201ENST00000576014 4281 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 RNGTTP1-201ENST00000420965 728 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AL645608.4-201ENST00000423619 154 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 RPL23AP1-201ENST00000428990 471 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC073410.1-201ENST00000435125 589 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 OR4A43P-201ENST00000532938 908 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 OR6C69P-201ENST00000394268 893 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC022034.3-201ENST00000471393 478 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC093827.1-201ENST00000480094 861 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC069366.1-201ENST00000583159 838 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AC125494.2-201ENST00000602431 657 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 KRT8P51-201ENST00000438938 274 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AL359073.1-201ENST00000448036 403 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 NIP7P2-201ENST00000485801 544 ntBASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALMS1Q8TCU4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
ALMS1Q8TCU4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
ALMS1Q8TCU4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
ALMS1Q8TCU4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC3.46□□□□□ -1.85
ALMS1Q8TCU4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AL451062.2-201ENST00000427515 271 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AL161722.2-201ENST00000434731 981 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 RPS29P9-201ENST00000440360 171 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 SNORD125-201ENST00000459538 96 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC011276.1-201ENST00000469688 323 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC010350.1-201ENST00000504908 231 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC093227.2-201ENST00000589357 285 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC020910.3-201ENST00000603701 874 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC005252.1-201ENST00000604518 1063 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 OR56B2P-202ENST00000641377 2453 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 MIR600-201ENST00000385007 98 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 OR10T1P-201ENST00000424327 947 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 BMS1P19-201ENST00000433925 393 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms