Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 AC135068.5-201ENST00000624197 983 ntBASIC6.2□□□□□ -1.42
NUP43Q8NFH3 AC061999.1-201ENST00000624454 177 ntBASIC6.2□□□□□ -1.42
NUP43Q8NFH3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 AC099654.12-201ENST00000639868 649 ntBASIC6.2□□□□□ -1.42
NUP43Q8NFH3 CASC19-264ENST00000641912 1184 ntBASIC6.2□□□□□ -1.42
NUP43Q8NFH3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 AC005618.1-201ENST00000606901 3148 ntBASIC6.2□□□□□ -1.42
NUP43Q8NFH3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 CDY11P-201ENST00000447168 1651 ntBASIC6.2□□□□□ -1.42
NUP43Q8NFH3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NUP43Q8NFH3 AC010329.1-201ENST00000593903 8328 ntBASIC6.2□□□□□ -1.42
NUP43Q8NFH3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AL589993.1-201ENST00000407450 2524 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 RNA5SP321-201ENST00000362722 111 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 RNA5SP188-201ENST00000362916 129 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 RN7SKP263-201ENST00000411194 309 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 FNDC3CP-201ENST00000420795 1155 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC006065.1-201ENST00000422539 802 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 CNOT7P1-201ENST00000429006 852 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 VN1R54P-201ENST00000435210 1049 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC013403.1-201ENST00000436954 263 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC122718.1-201ENST00000439448 744 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 ST13P20-201ENST00000447996 1065 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 FGF7P6-202ENST00000451282 293 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AL133480.2-201ENST00000456723 487 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 TREML3P-201ENST00000457327 501 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 FAM133DP-201ENST00000464802 691 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC068522.1-201ENST00000482895 345 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 RN7SL612P-201ENST00000497704 295 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 RNU6-1334P-201ENST00000516032 105 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC130366.1-201ENST00000526505 1192 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 OR9G2P-201ENST00000533326 880 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 RPS3AP4-201ENST00000555161 764 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 RBM22P12-201ENST00000567098 1255 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AP003115.1-201ENST00000569849 463 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC068020.1-201ENST00000594215 661 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC130352.1-201ENST00000602979 661 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC091133.5-201ENST00000603088 301 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC097467.4-201ENST00000605504 141 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC092354.1-201ENST00000606057 376 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AL513218.1-201ENST00000606527 391 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC012557.1-201ENST00000607115 611 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AL137000.1-201ENST00000610528 1244 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC027559.1-201ENST00000636288 271 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 AC087565.3-203ENST00000641018 837 ntBASIC6.19□□□□□ -1.42
NUP43Q8NFH3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP43Q8NFH3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms