Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC125336.1-201ENST00000508893 2827 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 HDAC1P2-201ENST00000453661 1398 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 MTND4P8-201ENST00000514997 1362 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RNU1-49P-201ENST00000363468 159 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RNA5SP279-201ENST00000365513 117 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 OR7E156P-201ENST00000400303 464 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RNA5SP198-201ENST00000410376 127 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RN7SKP240-201ENST00000410583 375 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RN7SKP108-201ENST00000411367 328 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC010099.3-201ENST00000423896 409 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 USP9YP11-201ENST00000427537 717 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC069540.1-201ENST00000446320 988 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AL022237.1-201ENST00000446663 358 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 MTCO3P35-201ENST00000485582 781 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC036111.2-201ENST00000533247 901 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC084121.1-201ENST00000533882 835 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC068305.2-201ENST00000550567 1205 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC009097.3-201ENST00000563557 1018 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 OR4H6P-201ENST00000563771 921 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC023825.1-201ENST00000566704 1030 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AGGF1P6-201ENST00000569213 976 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 MIR4675-201ENST00000577898 77 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 DHFRP1-201ENST00000579682 559 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RNU4ATAC-201ENST00000580972 127 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC013562.2-201ENST00000611632 603 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC010325.3-201ENST00000641084 394 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AL606537.1-201ENST00000607258 2011 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC093536.2-201ENST00000565257 1406 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 RBPJP2-201ENST00000618187 1444 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC096921.2-201ENST00000561507 1916 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 AC024587.1-201ENST00000505925 2157 ntBASIC5.82□□□□□ -1.48
SIMC1Q8NDZ2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 CASC19-284ENST00000642142 1868 ntBASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 RNU6-666P-201ENST00000363499 107 ntBASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 SNORD116-1-201ENST00000384335 95 ntBASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIMC1Q8NDZ2 PSMA6P1-201ENST00000400275 741 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms