Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 AC090888.3-201ENST00000558917 509 ntBASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 AC008521.2-201ENST00000591021 259 ntBASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 AC000068.2-201ENST00000608816 460 ntBASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 RN7SL787P-201ENST00000613000 284 ntBASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 TCP1P3-201ENST00000414406 1498 ntBASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ZNF439Q8NDP4 AC011755.1-201ENST00000623763 2049 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC104623.2-202ENST00000623477 4002 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC027279.1-201ENST00000568885 4284 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 OR9G4-201ENST00000302957 984 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 TMSB4XP4-201ENST00000323496 618 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 MIR133B-201ENST00000362210 119 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 RN7SKP15-201ENST00000364742 309 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 MIR137-201ENST00000385223 102 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 GAPDHP25-201ENST00000447061 1001 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC144530.1-201ENST00000452862 555 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 RANP1-206ENST00000455094 651 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 CBX1P5-201ENST00000475330 559 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 RPL7AP10-201ENST00000481016 791 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 RN7SL273P-201ENST00000481561 299 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 PPIAP19-201ENST00000486414 492 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC098976.1-201ENST00000513014 541 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC018552.1-201ENST00000562099 811 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC005341.1-201ENST00000571086 708 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 MIR3614-201ENST00000581261 86 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC009027.1-201ENST00000604510 479 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC104695.2-201ENST00000605056 775 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC015982.1-201ENST00000608113 465 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC026367.3-201ENST00000619032 590 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC006840.1-201ENST00000623069 542 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC132825.8-201ENST00000640783 297 ntBASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF439Q8NDP4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF439Q8NDP4 RNA5SP319-201ENST00000362768 119 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms