Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC168Q8NDH2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC168Q8NDH2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC168Q8NDH2 RNA5SP388-201ENST00000362584 119 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 RNA5SP326-201ENST00000363209 110 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 RNU1-24P-201ENST00000364285 165 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC016027.5-201ENST00000427227 210 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC073465.2-201ENST00000440938 498 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 HMGN2P25-201ENST00000486956 268 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 IGHVIII-13-1-201ENST00000517613 291 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC021483.2-201ENST00000567415 758 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC011944.2-201ENST00000624440 683 ntBASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC168Q8NDH2 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 AC006065.1-201ENST00000422539 802 ntBASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 RPL12P28-201ENST00000430852 489 ntBASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 AL365220.1-201ENST00000432923 399 ntBASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 MED28P5-201ENST00000528254 438 ntBASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 AC008785.1-201ENST00000624475 456 ntBASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC168Q8NDH2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 RNA5SP447-201ENST00000363749 119 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 MIR640-201ENST00000385086 96 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AL021331.1-201ENST00000402817 582 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AL596266.1-201ENST00000448132 400 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 PPM1AP1-201ENST00000502740 1135 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 MIR4715-201ENST00000584117 79 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AL356218.2-201ENST00000605264 187 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC003973.3-201ENST00000624863 2822 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 SNORA84-201ENST00000459229 133 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC063943.1-201ENST00000465434 453 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC021074.2-201ENST00000468434 172 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC068522.1-201ENST00000482895 345 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 RPSAP51-201ENST00000497462 645 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC084824.1-201ENST00000550917 1005 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AL163952.1-202ENST00000569625 600 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 BNIP3P19-201ENST00000605397 577 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC006600.2-201ENST00000624834 2506 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 AC092070.2-203ENST00000598377 3644 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms