Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 SETP15-201ENST00000412724 337 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AP000534.2-201ENST00000412729 568 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RPL7P56-201ENST00000429441 717 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC105399.1-202ENST00000447303 205 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC002553.2-201ENST00000453217 340 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AZGP1P2-201ENST00000454506 345 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RPL7P45-201ENST00000455851 743 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RN7SL177P-201ENST00000476596 299 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RN7SL629P-201ENST00000489622 285 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RPS4XP14-201ENST00000493072 781 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RN7SL447P-201ENST00000494711 245 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 SEPT10P1-201ENST00000517342 1162 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 FKBP1AP1-201ENST00000594588 318 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 CASC19-264ENST00000641912 1184 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC133552.1-201ENST00000569988 4007 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 AC006206.1-201ENST00000544842 3387 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AL359715.3-201ENST00000569267 2123 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 RANP7-201ENST00000418085 644 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 CYCSP6-201ENST00000434498 302 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 CYCSP12-201ENST00000437729 300 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 TCEA1P3-201ENST00000443005 880 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC069304.1-201ENST00000491593 704 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 SCARNA16.4-201ENST00000516956 187 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 IGLV2-28-201ENST00000520681 304 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 SETP1-201ENST00000556014 845 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 IMMP1LP3-201ENST00000604197 224 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC000068.2-201ENST00000608816 460 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AL359513.1-201ENST00000614364 557 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 WBP1LP8-201ENST00000617401 327 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC006840.1-201ENST00000623069 542 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 PCAT14-202ENST00000627127 3935 ntBASIC5.05□□□□□ -1.6
RTL4Q6ZR62 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.05□□□□□ -1.6
RTL4Q6ZR62 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL4Q6ZR62 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RTL4Q6ZR62 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.04□□□□□ -1.6
RTL4Q6ZR62 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL4Q6ZR62 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTL4Q6ZR62 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RTL4Q6ZR62 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms