Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.51□□□□□ -1.53
LRRC38Q5VT99 AC127024.6-201ENST00000621598 424 ntBASIC5.51□□□□□ -1.53
LRRC38Q5VT99 AL691477.1-201ENST00000624398 162 ntBASIC5.51□□□□□ -1.53
LRRC38Q5VT99 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 MTCO1P8-201ENST00000416914 1523 ntBASIC5.51□□□□□ -1.53
LRRC38Q5VT99 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC38Q5VT99 MAPK10-328ENST00000641553 4009 ntBASIC5.51□□□□□ -1.53
LRRC38Q5VT99 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 ADAM5-202ENST00000399789 1942 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RN7SKP124-201ENST00000364730 341 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RNU1-74P-201ENST00000384108 171 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RNU6-891P-201ENST00000384280 111 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 OR4K12P-201ENST00000406538 961 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RN7SKP293-201ENST00000411389 296 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RPS11P7-201ENST00000442125 465 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 AL356390.1-201ENST00000455684 397 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 HMGN1P8-201ENST00000463578 288 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RN7SL447P-201ENST00000494711 245 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 OR52A4P-203ENST00000498233 1014 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RNU6-751P-201ENST00000516382 101 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RNA5SP373-201ENST00000517271 95 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 AC112191.2-201ENST00000522428 333 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 AL121839.1-201ENST00000556233 1185 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 OR8G7P-201ENST00000616658 848 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC38Q5VT99 AC007342.5-201ENST00000571340 2142 ntBASIC5.5□□□□□ -1.53
LRRC38Q5VT99 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 CDC27P2-201ENST00000425026 1922 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 RNU6-697P-201ENST00000363348 107 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 RN7SKP286-201ENST00000410894 299 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 MTCO1P51-201ENST00000427672 1060 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC009238.2-201ENST00000431026 355 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC012075.1-201ENST00000436549 580 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AP000281.1-201ENST00000444036 316 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 RPL31P15-201ENST00000449770 338 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC104634.1-201ENST00000452720 462 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 RN7SL189P-201ENST00000468631 289 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC027026.1-201ENST00000532323 742 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC006349.1-201ENST00000555526 235 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 NPM1P45-201ENST00000583151 559 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC104695.2-201ENST00000605056 775 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 RN7SL787P-201ENST00000613000 284 ntBASIC5.49□□□□□ -1.53
LRRC38Q5VT99 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC38Q5VT99 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms