Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 RNU6-507P-201ENST00000516045 100 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 RNU6-416P-201ENST00000516265 103 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDH1Q08174 PSMB7P1-201ENST00000556349 514 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDH1Q08174 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC092032.1-201ENST00000603090 165 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 C8orf59P2-201ENST00000603441 271 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 AC092960.1-201ENST00000604762 351 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC104458.1-201ENST00000608243 463 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDH1Q08174 FRG2MP-201ENST00000613317 856 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 pRNA.9-201ENST00000618609 89 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 AC091544.5-201ENST00000620192 3815 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 MIR3688-2-201ENST00000636963 87 ntBASIC6.77□□□□□ -1.33
PCDH1Q08174 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH1Q08174 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH1Q08174 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH1Q08174 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC135352.1-201ENST00000506173 1418 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC112255.1-201ENST00000624070 2493 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AL590763.1-201ENST00000398297 1545 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC093297.3-201ENST00000607056 2517 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 RPL11P4-201ENST00000332269 436 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 RNU4-76P-201ENST00000364509 141 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 MT-TP-201ENST00000387461 68 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 SOD1P1-201ENST00000407803 440 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 RNU2-42P-201ENST00000410697 113 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 RPL12P10-201ENST00000413498 498 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC002069.1-201ENST00000429649 1159 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AL365184.2-201ENST00000431139 435 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 CEACAMP3-202ENST00000483806 638 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC109462.1-201ENST00000491087 368 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC108941.1-201ENST00000502853 530 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 MRPL49P1-201ENST00000505951 535 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC131392.1-201ENST00000506490 633 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC138409.2-202ENST00000507274 458 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC138866.2-201ENST00000508650 584 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC093824.1-201ENST00000508796 343 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 GUSBP9-201ENST00000510138 584 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 MAST4-IT1-201ENST00000514241 658 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC046134.1-201ENST00000514454 666 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 RFPL4AP3-201ENST00000515267 345 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 RN7SKP31-201ENST00000516354 278 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 RN7SKP233-201ENST00000517005 110 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC008802.1-201ENST00000519121 791 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 OR7E161P-201ENST00000533722 967 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 GLYCAM1-201ENST00000546596 285 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms