Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL450996.1-201ENST00000445574 1202 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL157385.1-201ENST00000446973 268 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 PRPF38AP1-201ENST00000451976 933 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL645937.3-201ENST00000453647 936 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC011476.1-201ENST00000466725 307 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 NIP7P2-201ENST00000485801 544 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 RPS24P16-201ENST00000497294 392 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC016559.2-201ENST00000510759 359 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 RNA5SP473-201ENST00000516402 125 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC006349.1-201ENST00000555526 235 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 MRPS21P7-201ENST00000566937 238 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 RBM22P12-201ENST00000567098 1255 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AP005403.1-201ENST00000579720 229 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC009237.13-201ENST00000603193 276 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC015871.5-202ENST00000623252 701 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC129915.3-201ENST00000634128 948 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC114786.1-201ENST00000512892 1415 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL450345.1-202ENST00000605741 3881 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AKR1B10P1-201ENST00000425765 942 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC005297.1-201ENST00000444765 862 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC090804.1-201ENST00000448870 490 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 LRRC37A14P-201ENST00000452297 462 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 VDAC2P4-201ENST00000452925 711 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC138938.1-201ENST00000515431 782 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 SNORA43.3-201ENST00000517240 103 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC024940.3-201ENST00000538551 316 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 DPPA2P4-201ENST00000563717 878 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 PRPF19P1-201ENST00000584766 898 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AL137072.1-201ENST00000603444 466 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 PPATP2-201ENST00000605635 508 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AL365181.4-201ENST00000609800 547 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AL096712.1-201ENST00000614561 159 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 AC104118.1-201ENST00000607625 1589 ntBASIC4.1□□□□□ -1.75
HIST1H1AQ02539 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HIST1H1AQ02539 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC100778.3-201ENST00000580060 1750 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 MAPK10-286ENST00000641208 8747 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms