Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MIR6886-201ENST00000619864 61 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.75□□□□□ -1.65
H3F3AP84243 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.75□□□□□ -1.65
H3F3AP84243 SMG1P4-204ENST00000523028 4131 ntBASIC4.75□□□□□ -1.65
H3F3AP84243 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
H3F3AP84243 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
H3F3AP84243 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
H3F3AP84243 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
H3F3AP84243 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.74□□□□□ -1.65
H3F3AP84243 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.74□□□□□ -1.65
H3F3AP84243 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
H3F3AP84243 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
H3F3AP84243 RN7SKP153-201ENST00000365026 316 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 SNORA67-201ENST00000384423 137 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 RNU1-149P-201ENST00000390870 161 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 RNA5SP241-201ENST00000391326 114 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 HSPA8P15-201ENST00000401676 786 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.74□□□□□ -1.65
H3F3AP84243 FAM96AP1-201ENST00000430879 482 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.74□□□□□ -1.65
H3F3AP84243 TCEA1P3-201ENST00000443005 880 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 AC104634.1-201ENST00000452720 462 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 COPS8P2-201ENST00000473228 627 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 AC022133.1-201ENST00000490961 571 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 RPSAP51-201ENST00000497462 645 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.74□□□□□ -1.65
H3F3AP84243 IMPA1P1-201ENST00000510718 842 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.74□□□□□ -1.65
H3F3AP84243 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.74□□□□□ -1.65
H3F3AP84243 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 AP000864.1-201ENST00000609424 650 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 MIR6729-201ENST00000618194 65 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 AC090527.3-201ENST00000619041 548 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
H3F3AP84243 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
H3F3AP84243 AC093591.2-201ENST00000565254 3843 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 AC068870.3-201ENST00000625077 2536 ntBASIC4.74□□□□□ -1.65
H3F3AP84243 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
H3F3AP84243 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
H3F3AP84243 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3F3AP84243 CDY11P-201ENST00000447168 1651 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
H3F3AP84243 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
H3F3AP84243 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
H3F3AP84243 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.73□□□□□ -1.65
H3F3AP84243 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
H3F3AP84243 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
H3F3AP84243 OR9G4-201ENST00000302957 984 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
H3F3AP84243 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
H3F3AP84243 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 RN7SKP74-201ENST00000362849 309 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 TRAV35-201ENST00000390462 330 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 EI24P3-201ENST00000399046 1062 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 RPL19P16-201ENST00000433839 588 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.73□□□□□ -1.65
H3F3AP84243 SEPT7P3-201ENST00000455017 621 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 OR2AO1P-201ENST00000476497 403 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 RPL7P39-201ENST00000481157 744 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 AC138409.2-202ENST00000507274 458 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.73□□□□□ -1.65
H3F3AP84243 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.73□□□□□ -1.65
H3F3AP84243 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 AC069307.1-201ENST00000602820 447 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 AC009597.2-201ENST00000604659 592 ntBASIC4.73□□□□□ -1.65
H3F3AP84243 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
H3F3AP84243 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
H3F3AP84243 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
H3F3AP84243 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
H3F3AP84243 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
H3F3AP84243 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
H3F3AP84243 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
H3F3AP84243 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms