Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CX3CL1P78423 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 RNU6-532P-201ENST00000384318 107 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CL1P78423 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CL1P78423 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 PNRC2P1-201ENST00000423940 420 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC069540.1-201ENST00000446320 988 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 RPS20P4-201ENST00000461659 355 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AL122020.1-201ENST00000472287 459 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 RN7SL193P-201ENST00000491708 276 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 RN7SL57P-201ENST00000493687 290 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 OR5H3P-201ENST00000502817 919 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC025458.1-201ENST00000506046 166 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 OR5H7P-201ENST00000514084 930 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 RNU5A-7P-201ENST00000515979 116 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 RN7SKP141-201ENST00000516167 338 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 SNORA31.13-201ENST00000516624 135 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.66□□□□□ -1.66
CX3CL1P78423 PCNAP4-201ENST00000532690 730 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 OR8X1P-201ENST00000534542 869 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC090424.1-201ENST00000535243 736 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC068305.2-201ENST00000550567 1205 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 ZNF322P1-201ENST00000568013 1209 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC006115.2-201ENST00000596823 202 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.66□□□□□ -1.66
CX3CL1P78423 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AF129408.1-201ENST00000608767 431 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AP004607.9-201ENST00000618202 316 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC024884.1-201ENST00000620583 399 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC129778.1-202ENST00000623812 261 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AL591379.1-207ENST00000635982 261 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC073869.7-201ENST00000640874 297 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 AC119674.1-212ENST00000641155 993 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 NXF4-202ENST00000416098 1465 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.66□□□□□ -1.66
CX3CL1P78423 AC008432.1-201ENST00000615912 1320 ntBASIC4.66□□□□□ -1.66
CX3CL1P78423 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CX3CL1P78423 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CL1P78423 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.65□□□□□ -1.66
CX3CL1P78423 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CL1P78423 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CL1P78423 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.65□□□□□ -1.66
CX3CL1P78423 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CL1P78423 AP004607.3-201ENST00000530354 3915 ntBASIC4.65□□□□□ -1.66
CX3CL1P78423 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CL1P78423 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CX3CL1P78423 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
CX3CL1P78423 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.65□□□□□ -1.66
CX3CL1P78423 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.65□□□□□ -1.66
CX3CL1P78423 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 RN7SKP69-201ENST00000365390 305 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CX3CL1P78423 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CL1P78423 RNU6-481P-201ENST00000384194 107 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 RNA5SP187-201ENST00000384400 119 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 RNU6-925P-201ENST00000384629 104 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CX3CL1P78423 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 AL024507.1-201ENST00000412741 274 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 BX284632.2-201ENST00000421091 399 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms