Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 GAPDHP62-201ENST00000515313 990 ntBASIC5.47□□□□□ -1.53
RAE1P78406 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 AC027369.2-201ENST00000528030 440 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.47□□□□□ -1.53
RAE1P78406 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 AC137627.1-201ENST00000545761 289 ntBASIC5.47□□□□□ -1.53
RAE1P78406 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.47□□□□□ -1.53
RAE1P78406 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 AC068020.1-201ENST00000594215 661 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AC130352.1-201ENST00000602979 661 ntBASIC5.47□□□□□ -1.53
RAE1P78406 RPL12P48-201ENST00000605620 304 ntBASIC5.47□□□□□ -1.53
RAE1P78406 NANOGP3-201ENST00000605855 286 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AC009779.8-202ENST00000607990 932 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AL159169.2-201ENST00000610061 1269 ntBASIC5.47□□□□□ -1.53
RAE1P78406 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 AC244100.4-201ENST00000617747 388 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AC241377.1-201ENST00000619797 406 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AC024884.1-201ENST00000620583 399 ntBASIC5.47□□□□□ -1.53
RAE1P78406 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 AC132825.7-201ENST00000638744 335 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.47□□□□□ -1.53
RAE1P78406 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 AC245100.2-201ENST00000454544 1679 ntBASIC5.47□□□□□ -1.53
RAE1P78406 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
RAE1P78406 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
RAE1P78406 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 AL161912.4-201ENST00000623889 2468 ntBASIC5.46□□□□□ -1.54
RAE1P78406 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.46□□□□□ -1.54
RAE1P78406 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAE1P78406 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RAE1P78406 AL034403.1-201ENST00000399414 885 ntBASIC5.46□□□□□ -1.54
RAE1P78406 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
RAE1P78406 AC096921.1-201ENST00000411661 375 ntBASIC5.46□□□□□ -1.54
RAE1P78406 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.46□□□□□ -1.54
RAE1P78406 OR51B3P-201ENST00000412287 913 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.46□□□□□ -1.54
RAE1P78406 RPA2P2-201ENST00000419698 796 ntBASIC5.46□□□□□ -1.54
RAE1P78406 XKRYP1-201ENST00000423438 492 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.46□□□□□ -1.54
RAE1P78406 AC093422.3-201ENST00000428506 305 ntBASIC5.46□□□□□ -1.54
RAE1P78406 XKRYP2-201ENST00000432915 492 ntBASIC5.46□□□□□ -1.54
RAE1P78406 PCBP2P1-201ENST00000437262 977 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.46□□□□□ -1.54
RAE1P78406 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC069540.1-201ENST00000446320 988 ntBASIC5.46□□□□□ -1.54
RAE1P78406 MTCYBP11-201ENST00000447254 1109 ntBASIC5.46□□□□□ -1.54
RAE1P78406 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.46□□□□□ -1.54
RAE1P78406 MTND1P31-201ENST00000449206 961 ntBASIC5.46□□□□□ -1.54
RAE1P78406 RPL5P12-201ENST00000477071 851 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC073610.1-201ENST00000489971 396 ntBASIC5.46□□□□□ -1.54
RAE1P78406 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.46□□□□□ -1.54
RAE1P78406 OR7E157P-201ENST00000494376 911 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.46□□□□□ -1.54
RAE1P78406 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.46□□□□□ -1.54
RAE1P78406 AC026414.1-201ENST00000504046 698 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC093534.1-201ENST00000504977 132 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC122718.2-201ENST00000505325 591 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC025458.1-201ENST00000506046 166 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.46□□□□□ -1.54
RAE1P78406 AC147055.3-201ENST00000510547 851 ntBASIC5.46□□□□□ -1.54
RAE1P78406 RNA5SP473-201ENST00000516402 125 ntBASIC5.46□□□□□ -1.54
RAE1P78406 MTCYBP19-201ENST00000517463 1124 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC011853.1-201ENST00000518911 454 ntBASIC5.46□□□□□ -1.54
RAE1P78406 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.46□□□□□ -1.54
RAE1P78406 MORF4L1P3-201ENST00000525966 950 ntBASIC5.46□□□□□ -1.54
RAE1P78406 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RAE1P78406 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.46□□□□□ -1.54
RAE1P78406 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.46□□□□□ -1.54
RAE1P78406 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.46□□□□□ -1.54
RAE1P78406 MTCYBP23-201ENST00000558717 1102 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.46□□□□□ -1.54
RAE1P78406 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.46□□□□□ -1.54
RAE1P78406 FAM106CP-201ENST00000582212 507 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.46□□□□□ -1.54
RAE1P78406 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.46□□□□□ -1.54
RAE1P78406 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.46□□□□□ -1.54
RAE1P78406 RNU4-5P-201ENST00000607255 135 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AP001052.1-201ENST00000626421 99 ntBASIC5.46□□□□□ -1.54
RAE1P78406 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.46□□□□□ -1.54
RAE1P78406 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RAE1P78406 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.46□□□□□ -1.54
RAE1P78406 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RAE1P78406 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms