Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TAS2R6P-201ENST00000605022 826 ntBASIC5.81□□□□□ -1.48
TPM4P67936 AC008115.3-201ENST00000614874 549 ntBASIC5.81□□□□□ -1.48
TPM4P67936 AC132068.1-201ENST00000623805 459 ntBASIC5.81□□□□□ -1.48
TPM4P67936 AC073592.6-201ENST00000624271 415 ntBASIC5.81□□□□□ -1.48
TPM4P67936 AC007683.2-201ENST00000624681 714 ntBASIC5.81□□□□□ -1.48
TPM4P67936 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
TPM4P67936 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.81□□□□□ -1.48
TPM4P67936 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TPM4P67936 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM4P67936 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TPM4P67936 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TPM4P67936 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TPM4P67936 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TPM4P67936 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.8□□□□□ -1.48
TPM4P67936 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TPM4P67936 SNORA16A-201ENST00000384342 137 ntBASIC5.8□□□□□ -1.48
TPM4P67936 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TPM4P67936 OR13Z1P-201ENST00000416141 834 ntBASIC5.8□□□□□ -1.48
TPM4P67936 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.8□□□□□ -1.48
TPM4P67936 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TPM4P67936 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.8□□□□□ -1.48
TPM4P67936 GAPDHP34-201ENST00000432112 823 ntBASIC5.8□□□□□ -1.48
TPM4P67936 GYG1P1-201ENST00000460864 698 ntBASIC5.8□□□□□ -1.48
TPM4P67936 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.8□□□□□ -1.48
TPM4P67936 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.8□□□□□ -1.48
TPM4P67936 AC138938.1-201ENST00000515431 782 ntBASIC5.8□□□□□ -1.48
TPM4P67936 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.8□□□□□ -1.48
TPM4P67936 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.8□□□□□ -1.48
TPM4P67936 AC138207.8-204ENST00000579588 527 ntBASIC5.8□□□□□ -1.48
TPM4P67936 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.8□□□□□ -1.48
TPM4P67936 AL034374.2-201ENST00000605281 548 ntBASIC5.8□□□□□ -1.48
TPM4P67936 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TPM4P67936 AC118658.2-201ENST00000618697 459 ntBASIC5.8□□□□□ -1.48
TPM4P67936 AL683826.1-201ENST00000624104 627 ntBASIC5.8□□□□□ -1.48
TPM4P67936 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TPM4P67936 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.8□□□□□ -1.48
TPM4P67936 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.8□□□□□ -1.48
TPM4P67936 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.8□□□□□ -1.48
TPM4P67936 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 TET1P1-201ENST00000426627 2301 ntBASIC5.8□□□□□ -1.48
TPM4P67936 LINC01355-201ENST00000566551 5444 ntBASIC5.8□□□□□ -1.48
TPM4P67936 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.8□□□□□ -1.48
TPM4P67936 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TPM4P67936 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TPM4P67936 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TPM4P67936 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.79□□□□□ -1.48
TPM4P67936 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.79□□□□□ -1.48
TPM4P67936 CBX1P3-201ENST00000413296 527 ntBASIC5.79□□□□□ -1.48
TPM4P67936 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.79□□□□□ -1.48
TPM4P67936 RPL34P3-201ENST00000421454 338 ntBASIC5.79□□□□□ -1.48
TPM4P67936 AL662874.1-201ENST00000426065 230 ntBASIC5.79□□□□□ -1.48
TPM4P67936 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.79□□□□□ -1.48
TPM4P67936 AC019185.1-201ENST00000442718 389 ntBASIC5.79□□□□□ -1.48
TPM4P67936 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.79□□□□□ -1.48
TPM4P67936 AL445665.1-202ENST00000452436 324 ntBASIC5.79□□□□□ -1.48
TPM4P67936 AC011476.1-201ENST00000466725 307 ntBASIC5.79□□□□□ -1.48
TPM4P67936 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.79□□□□□ -1.48
TPM4P67936 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.79□□□□□ -1.48
TPM4P67936 RN7SKP46-201ENST00000515942 234 ntBASIC5.79□□□□□ -1.48
TPM4P67936 RNA5SP303-201ENST00000516192 130 ntBASIC5.79□□□□□ -1.48
TPM4P67936 RNA5SP271-201ENST00000516700 88 ntBASIC5.79□□□□□ -1.48
TPM4P67936 CYCSP22-201ENST00000517555 339 ntBASIC5.79□□□□□ -1.48
TPM4P67936 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.79□□□□□ -1.48
TPM4P67936 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.79□□□□□ -1.48
TPM4P67936 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.79□□□□□ -1.48
TPM4P67936 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.79□□□□□ -1.48
TPM4P67936 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TPM4P67936 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.79□□□□□ -1.48
TPM4P67936 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.79□□□□□ -1.48
TPM4P67936 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.79□□□□□ -1.48
TPM4P67936 BNIP3P35-201ENST00000604530 490 ntBASIC5.79□□□□□ -1.48
TPM4P67936 AC108359.1-201ENST00000616451 1211 ntBASIC5.79□□□□□ -1.48
TPM4P67936 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.79□□□□□ -1.48
TPM4P67936 MIR193BHG-214ENST00000641765 509 ntBASIC5.79□□□□□ -1.48
TPM4P67936 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TPM4P67936 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TPM4P67936 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TPM4P67936 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TPM4P67936 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TPM4P67936 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TPM4P67936 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM4P67936 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM4P67936 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 RN7SKP171-201ENST00000364417 303 ntBASIC5.78□□□□□ -1.48
TPM4P67936 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms