Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 Y_RNA.110-201ENST00000363220 99 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RHBDL3P58872 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RHBDL3P58872 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RHBDL3P58872 RPL23AP17-201ENST00000401064 499 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 SPTLC1P2-201ENST00000407089 121 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 AL390774.1-201ENST00000411924 246 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 AL357078.2-201ENST00000416486 427 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 RPL7L1P9-201ENST00000431298 745 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 AC073410.1-201ENST00000435125 589 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.68□□□□□ -1.34
RHBDL3P58872 PSMC1P13-201ENST00000458195 985 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 RPS7P6-201ENST00000485777 579 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 FTH1P8-201ENST00000498161 514 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.68□□□□□ -1.34
RHBDL3P58872 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.68□□□□□ -1.34
RHBDL3P58872 NPM1P35-201ENST00000533043 868 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 DHFRP1-201ENST00000579682 559 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 CBX3P2-202ENST00000583365 535 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.68□□□□□ -1.34
RHBDL3P58872 AL512329.2-201ENST00000607350 548 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 AL021707.7-201ENST00000607991 416 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 MIR6837-201ENST00000620884 64 ntBASIC6.68□□□□□ -1.34
RHBDL3P58872 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RHBDL3P58872 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
RHBDL3P58872 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.68□□□□□ -1.34
RHBDL3P58872 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RHBDL3P58872 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RHBDL3P58872 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RHBDL3P58872 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RHBDL3P58872 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RHBDL3P58872 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RHBDL3P58872 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RHBDL3P58872 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
RHBDL3P58872 RNU1-77P-201ENST00000390868 162 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 U3.23-201ENST00000391132 200 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AP000534.2-201ENST00000412729 568 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.67□□□□□ -1.34
RHBDL3P58872 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AL035551.1-201ENST00000446931 348 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 RN7SL51P-201ENST00000468230 285 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 SYT14P1-201ENST00000481459 721 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.67□□□□□ -1.34
RHBDL3P58872 CDH12P2-201ENST00000504393 298 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 AC006499.3-201ENST00000506077 748 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 AC020937.1-201ENST00000519677 1013 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.67□□□□□ -1.34
RHBDL3P58872 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AL513327.3-201ENST00000602618 469 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 AL049844.2-201ENST00000604280 628 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 NANOGP3-201ENST00000605855 286 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.67□□□□□ -1.34
RHBDL3P58872 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RHBDL3P58872 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RHBDL3P58872 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AC010329.1-201ENST00000593903 8328 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RHBDL3P58872 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
RHBDL3P58872 AL359715.4-201ENST00000606629 1436 ntBASIC6.67□□□□□ -1.34
RHBDL3P58872 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RHBDL3P58872 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RHBDL3P58872 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AP001002.1-201ENST00000625148 1513 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 ZNF90P1-201ENST00000480493 1951 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RHBDL3P58872 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms