Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN20P56880 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC008691.1-209ENST00000642094 814 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN20P56880 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 OR13C1P-202ENST00000641378 2919 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLDN20P56880 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 AC117409.1-201ENST00000470499 1310 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN20P56880 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN20P56880 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 MRE11P1-201ENST00000464884 2127 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLDN20P56880 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 SNORA64.1-201ENST00000362600 132 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 SNORA70.6-201ENST00000383934 134 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 SNORA17A-201ENST00000391185 133 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 Z86062.1-201ENST00000406773 777 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.17□□□□□ -1.58
CLDN20P56880 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN20P56880 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN20P56880 HSFY1P1-201ENST00000423928 1178 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 MORF4L1P7-201ENST00000426038 703 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AL662874.1-201ENST00000426065 230 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 DSTNP5-201ENST00000427921 523 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AL022331.1-201ENST00000429025 477 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.17□□□□□ -1.58
CLDN20P56880 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN20P56880 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN20P56880 NPM1P19-201ENST00000450070 712 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 CBX1P2-201ENST00000453841 458 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN20P56880 NXT1P1-201ENST00000458481 316 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AC092902.1-201ENST00000486999 259 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN20P56880 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.17□□□□□ -1.58
CLDN20P56880 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN20P56880 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN20P56880 AP001804.2-201ENST00000533932 910 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN20P56880 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN20P56880 AL163952.1-202ENST00000569625 600 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.17□□□□□ -1.58
CLDN20P56880 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CLDN20P56880 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN20P56880 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN20P56880 AC015849.2-201ENST00000605738 409 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AC026790.2-201ENST00000606282 430 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AL162574.1-201ENST00000615702 950 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AC126175.1-201ENST00000617041 758 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN20P56880 AL645927.2-201ENST00000618350 349 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN20P56880 SNORA17.5-201ENST00000630429 132 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 HSPA8P14-201ENST00000552265 1805 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN20P56880 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CLDN20P56880 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
CLDN20P56880 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN20P56880 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN20P56880 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.17□□□□□ -1.58
CLDN20P56880 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN20P56880 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 DDX18P6-201ENST00000450119 1997 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CLDN20P56880 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 AL442128.2-201ENST00000620246 1824 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CLDN20P56880 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN20P56880 RNA5SP435-201ENST00000364044 108 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLDN20P56880 RPL11P3-201ENST00000395256 523 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CLDN20P56880 AL353692.2-201ENST00000407054 335 ntBASIC5.16□□□□□ -1.58
CLDN20P56880 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN20P56880 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms