Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC068870.1-201ENST00000563737 2455 ntBASIC5.09□□□□□ -1.59
CDH11P55287 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CDH11P55287 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDH11P55287 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.09□□□□□ -1.59
CDH11P55287 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CDH11P55287 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CDH11P55287 AC002525.1-201ENST00000624392 1622 ntBASIC5.09□□□□□ -1.59
CDH11P55287 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH11P55287 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDH11P55287 RNA5SP500-201ENST00000364486 119 ntBASIC5.09□□□□□ -1.59
CDH11P55287 AC005522.1-201ENST00000395416 346 ntBASIC5.09□□□□□ -1.59
CDH11P55287 NACAP7-201ENST00000407371 609 ntBASIC5.09□□□□□ -1.59
CDH11P55287 SEPT7P8-201ENST00000413308 775 ntBASIC5.09□□□□□ -1.59
CDH11P55287 OR2AT2P-201ENST00000413438 905 ntBASIC5.09□□□□□ -1.59
CDH11P55287 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH11P55287 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH11P55287 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH11P55287 NDUFB4P8-201ENST00000435351 367 ntBASIC5.09□□□□□ -1.59
CDH11P55287 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH11P55287 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH11P55287 AC093166.4-201ENST00000457867 318 ntBASIC5.09□□□□□ -1.59
CDH11P55287 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH11P55287 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CDH11P55287 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH11P55287 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 NENFP3-201ENST00000503735 313 ntBASIC5.09□□□□□ -1.59
CDH11P55287 MTND3P3-201ENST00000505004 126 ntBASIC5.09□□□□□ -1.59
CDH11P55287 SCARNA21.2-201ENST00000516600 166 ntBASIC5.09□□□□□ -1.59
CDH11P55287 SEPT10P1-201ENST00000517342 1162 ntBASIC5.09□□□□□ -1.59
CDH11P55287 FTH1P11-201ENST00000517577 551 ntBASIC5.09□□□□□ -1.59
CDH11P55287 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH11P55287 AP003049.1-201ENST00000529418 457 ntBASIC5.09□□□□□ -1.59
CDH11P55287 HMGN2P36-201ENST00000529541 409 ntBASIC5.09□□□□□ -1.59
CDH11P55287 OR4R2P-201ENST00000530815 597 ntBASIC5.09□□□□□ -1.59
CDH11P55287 AC134349.2-201ENST00000535136 910 ntBASIC5.09□□□□□ -1.59
CDH11P55287 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH11P55287 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH11P55287 AGGF1P7-201ENST00000562369 913 ntBASIC5.09□□□□□ -1.59
CDH11P55287 MIR7853-201ENST00000584820 132 ntBASIC5.09□□□□□ -1.59
CDH11P55287 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH11P55287 AC135803.1-201ENST00000608748 565 ntBASIC5.09□□□□□ -1.59
CDH11P55287 MIR6768-201ENST00000610734 72 ntBASIC5.09□□□□□ -1.59
CDH11P55287 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 AC138965.3-201ENST00000623875 498 ntBASIC5.09□□□□□ -1.59
CDH11P55287 AC097372.4-201ENST00000625025 466 ntBASIC5.09□□□□□ -1.59
CDH11P55287 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH11P55287 MIR193BHG-214ENST00000641765 509 ntBASIC5.09□□□□□ -1.59
CDH11P55287 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH11P55287 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDH11P55287 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH11P55287 MAPK10-328ENST00000641553 4009 ntBASIC5.09□□□□□ -1.6
CDH11P55287 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
CDH11P55287 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH11P55287 ICE2P1-201ENST00000512800 1849 ntBASIC5.09□□□□□ -1.6
CDH11P55287 MRRFP1-201ENST00000435941 1675 ntBASIC5.08□□□□□ -1.6
CDH11P55287 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 AC068446.1-201ENST00000556425 1549 ntBASIC5.08□□□□□ -1.6
CDH11P55287 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 OR13C1P-202ENST00000641378 2919 ntBASIC5.08□□□□□ -1.6
CDH11P55287 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 AL357752.1-201ENST00000412817 349 ntBASIC5.08□□□□□ -1.6
CDH11P55287 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 AL513325.1-201ENST00000417716 1034 ntBASIC5.08□□□□□ -1.6
CDH11P55287 NIFKP3-201ENST00000417799 865 ntBASIC5.08□□□□□ -1.6
CDH11P55287 RPL34P3-201ENST00000421454 338 ntBASIC5.08□□□□□ -1.6
CDH11P55287 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 AC073465.2-201ENST00000440938 498 ntBASIC5.08□□□□□ -1.6
CDH11P55287 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 RAB28P3-201ENST00000448325 597 ntBASIC5.08□□□□□ -1.6
CDH11P55287 AC083899.1-201ENST00000454465 3819 ntBASIC5.08□□□□□ -1.6
CDH11P55287 MTND2P39-201ENST00000457230 764 ntBASIC5.08□□□□□ -1.6
CDH11P55287 RPSAP39-201ENST00000467439 883 ntBASIC5.08□□□□□ -1.6
CDH11P55287 RN7SL188P-201ENST00000469842 285 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms