Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RPL7P51-201ENST00000490532 749 ntBASIC6.06□□□□□ -1.44
COPB1P53618 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 AP000619.2-201ENST00000546014 969 ntBASIC6.06□□□□□ -1.44
COPB1P53618 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.06□□□□□ -1.44
COPB1P53618 AC074029.2-201ENST00000551045 634 ntBASIC6.06□□□□□ -1.44
COPB1P53618 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.06□□□□□ -1.44
COPB1P53618 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.06□□□□□ -1.44
COPB1P53618 AC006116.5-201ENST00000591936 559 ntBASIC6.06□□□□□ -1.44
COPB1P53618 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 KATNBL1P5-201ENST00000605015 517 ntBASIC6.06□□□□□ -1.44
COPB1P53618 AC097460.3-201ENST00000623099 442 ntBASIC6.06□□□□□ -1.44
COPB1P53618 AL445984.1-201ENST00000637834 659 ntBASIC6.06□□□□□ -1.44
COPB1P53618 OR8G3P-202ENST00000641572 1255 ntBASIC6.06□□□□□ -1.44
COPB1P53618 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COPB1P53618 AL360270.2-201ENST00000562952 5985 ntBASIC6.06□□□□□ -1.44
COPB1P53618 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 AC005261.2-201ENST00000593427 4258 ntBASIC6.06□□□□□ -1.44
COPB1P53618 AC110792.3-201ENST00000595906 1614 ntBASIC6.06□□□□□ -1.44
COPB1P53618 AC002525.1-201ENST00000624392 1622 ntBASIC6.06□□□□□ -1.44
COPB1P53618 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.05□□□□□ -1.44
COPB1P53618 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB1P53618 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COPB1P53618 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COPB1P53618 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.05□□□□□ -1.44
COPB1P53618 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.05□□□□□ -1.44
COPB1P53618 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 RN7SKP186-201ENST00000365371 303 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AL353625.1-202ENST00000366273 571 ntBASIC6.05□□□□□ -1.44
COPB1P53618 RNU6-40P-201ENST00000384254 107 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AL050305.1-201ENST00000399993 1230 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AL589994.1-201ENST00000404962 340 ntBASIC6.05□□□□□ -1.44
COPB1P53618 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.05□□□□□ -1.44
COPB1P53618 HMGN1P20-201ENST00000411849 300 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB1P53618 AL035660.1-201ENST00000422041 222 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.05□□□□□ -1.44
COPB1P53618 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB1P53618 OFD1P3Y-201ENST00000453312 783 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.05□□□□□ -1.44
COPB1P53618 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.05□□□□□ -1.44
COPB1P53618 AC114322.1-201ENST00000506771 926 ntBASIC6.05□□□□□ -1.44
COPB1P53618 RNU6-491P-201ENST00000516099 110 ntBASIC6.05□□□□□ -1.44
COPB1P53618 RNU6-1102P-201ENST00000516149 96 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB1P53618 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.05□□□□□ -1.44
COPB1P53618 MRPS16P1-201ENST00000523462 412 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB1P53618 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.05□□□□□ -1.44
COPB1P53618 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB1P53618 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB1P53618 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.05□□□□□ -1.44
COPB1P53618 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.05□□□□□ -1.44
COPB1P53618 AC015802.2-201ENST00000589690 189 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AC068313.1-201ENST00000604028 1008 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AC034236.3-201ENST00000605999 461 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AC129778.1-202ENST00000623812 261 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AC010608.3-201ENST00000625048 527 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AL356118.1-201ENST00000635272 1078 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AL591379.1-207ENST00000635982 261 ntBASIC6.05□□□□□ -1.44
COPB1P53618 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.05□□□□□ -1.44
COPB1P53618 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 CASC19-261ENST00000641853 1638 ntBASIC6.05□□□□□ -1.44
COPB1P53618 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 AC003973.3-201ENST00000624863 2822 ntBASIC6.05□□□□□ -1.44
COPB1P53618 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.05□□□□□ -1.44
COPB1P53618 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.05□□□□□ -1.44
COPB1P53618 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB1P53618 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COPB1P53618 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.04□□□□□ -1.44
COPB1P53618 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COPB1P53618 SUGT1P2-201ENST00000379452 992 ntBASIC6.04□□□□□ -1.44
COPB1P53618 RNA5SP187-201ENST00000384400 119 ntBASIC6.04□□□□□ -1.44
COPB1P53618 OR7E101P-201ENST00000400428 513 ntBASIC6.04□□□□□ -1.44
COPB1P53618 NPM1P38-201ENST00000403835 865 ntBASIC6.04□□□□□ -1.44
COPB1P53618 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.04□□□□□ -1.44
COPB1P53618 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.04□□□□□ -1.44
COPB1P53618 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COPB1P53618 AC127526.2-201ENST00000426436 775 ntBASIC6.04□□□□□ -1.44
COPB1P53618 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.04□□□□□ -1.44
COPB1P53618 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.04□□□□□ -1.44
COPB1P53618 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.04□□□□□ -1.44
COPB1P53618 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms