Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GTF2A1P52655 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.09□□□□□ -1.59
GTF2A1P52655 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
GTF2A1P52655 QRSL1P1-201ENST00000400977 1540 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
GTF2A1P52655 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
GTF2A1P52655 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GTF2A1P52655 SUGT1P2-201ENST00000379452 992 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
GTF2A1P52655 RNA5SP104-201ENST00000410989 118 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.09□□□□□ -1.59
GTF2A1P52655 RPL35AP3-201ENST00000414680 288 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GTF2A1P52655 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC130360.1-201ENST00000425489 1117 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 AC023141.3-201ENST00000436698 278 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.09□□□□□ -1.59
GTF2A1P52655 TRIM60P16-201ENST00000444048 694 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AL445466.1-201ENST00000448432 357 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 AL445991.1-201ENST00000450381 475 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 AL356981.1-201ENST00000454879 684 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 H3F3AP5-201ENST00000475267 429 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.09□□□□□ -1.59
GTF2A1P52655 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.09□□□□□ -1.59
GTF2A1P52655 RN7SL371P-201ENST00000578099 267 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.09□□□□□ -1.59
GTF2A1P52655 AC145423.1-201ENST00000605712 336 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 AC078899.5-201ENST00000612475 178 ntBASIC5.09□□□□□ -1.59
GTF2A1P52655 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GTF2A1P52655 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.09□□□□□ -1.59
GTF2A1P52655 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
GTF2A1P52655 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GTF2A1P52655 IQCB2P-201ENST00000401788 1633 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GTF2A1P52655 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GTF2A1P52655 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GTF2A1P52655 AC117409.1-201ENST00000470499 1310 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GTF2A1P52655 SELENOWP1-201ENST00000322792 252 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 RNU1-20P-201ENST00000363314 162 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.08□□□□□ -1.6
GTF2A1P52655 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.08□□□□□ -1.6
GTF2A1P52655 AC007679.3-201ENST00000434035 414 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 AL357520.1-201ENST00000441557 453 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.08□□□□□ -1.6
GTF2A1P52655 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.08□□□□□ -1.6
GTF2A1P52655 OR7E116P-201ENST00000448529 957 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 PPIAP32-201ENST00000449940 472 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.08□□□□□ -1.6
GTF2A1P52655 AC023245.1-201ENST00000468501 517 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 HMGN1P16-201ENST00000508308 283 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 RNA5SP96-201ENST00000516041 107 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 RNA5SP392-201ENST00000516905 112 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 IGLVIV-53-201ENST00000520107 367 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
GTF2A1P52655 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.08□□□□□ -1.6
GTF2A1P52655 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.08□□□□□ -1.6
GTF2A1P52655 HMGB3P26-201ENST00000560051 582 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.08□□□□□ -1.6
GTF2A1P52655 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.08□□□□□ -1.6
GTF2A1P52655 MRPL45P2-203ENST00000573318 473 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 RN7SL657P-201ENST00000582431 293 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.08□□□□□ -1.6
GTF2A1P52655 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.08□□□□□ -1.6
GTF2A1P52655 AL591222.2-201ENST00000604443 754 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 AC011891.2-201ENST00000604949 397 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 MIR6885-201ENST00000612241 66 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.08□□□□□ -1.6
GTF2A1P52655 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
GTF2A1P52655 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GTF2A1P52655 USP9YP4-201ENST00000424401 1745 ntBASIC5.08□□□□□ -1.6
GTF2A1P52655 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GTF2A1P52655 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.08□□□□□ -1.6
GTF2A1P52655 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GTF2A1P52655 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GTF2A1P52655 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
GTF2A1P52655 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GTF2A1P52655 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GTF2A1P52655 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GTF2A1P52655 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.07□□□□□ -1.6
GTF2A1P52655 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
GTF2A1P52655 MTHFD2P5-201ENST00000320415 844 ntBASIC5.07□□□□□ -1.6
GTF2A1P52655 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.07□□□□□ -1.6
GTF2A1P52655 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GTF2A1P52655 RNA5SP52-201ENST00000362448 134 ntBASIC5.07□□□□□ -1.6
GTF2A1P52655 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
GTF2A1P52655 MIR93-201ENST00000385024 80 ntBASIC5.07□□□□□ -1.6
GTF2A1P52655 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GTF2A1P52655 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms